RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 ZNF143P52747 638 aaPredicted RBP16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 TAS2R40P59535 323 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 ADIGQ0VDE8 80 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 NFE2Q16621 373 aaPredicted RBP16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 RAB41Q5JT25 222 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 EFHC1Q5JVL4 640 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 DAB2IPQ5VWQ8 1189 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 PSRC1Q6PGN9 363 aaPredicted RBP16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 ANKS3Q6ZW76 656 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 RSRC2Q7L4I2 434 aaKnown RBP16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 TAS1R1Q7RTX1 841 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 RNF168Q8IYW5 571 aaPredicted RBP16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 SIX6OS1Q8N1H7 587 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 CLEC4CQ8WTT0 213 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 RXFP2Q8WXD0 754 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 GOLGA1Q92805 767 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 B3GALT6Q96L58 329 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 YME1L1Q96TA2 773 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.64■□□□□ 0.257e-6■■□□□ 12.2
PCYT1A-212ENST00000460677 PNPLA8Q9NP80 782 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 SMARCAL1Q9NZC9 954 aa16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 MRPL42Q9Y6G3 142 aaKnown RBP16.64■□□□□ 0.25
PCYT1A-212ENST00000460677 VWA8A3KMH1 1905 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 PGRMC1O00264 195 aaKnown RBP16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 DPYSL4O14531 572 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 GRAP2O75791 330 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 FLT3P36888 993 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 SSR1P43307 286 aaKnown RBP16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 TKTL1P51854 596 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 MRPS5P82675 430 aaKnown RBP16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 ADCY1Q08828 1119 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 TAF5Q15542 800 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 CLUL1Q15846 466 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 USP41Q3LFD5 358 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 RTP2Q5QGT7 225 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 TMEM240Q5SV17 173 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 LRRC38Q5VT99 294 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 TRNP1Q6NT89 227 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 SLC39A11Q8N1S5 342 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 SPATA4Q8NEY3 305 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 UBXN4Q92575 508 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 FUBP3Q96I24 572 aaKnown RBP eCLIP16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 RNPC3Q96LT9 517 aaKnown RBP16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 CNPY3Q9BT09 278 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 HTATIP2Q9BUP3 242 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 PLVAPQ9BX97 442 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 CNGB3Q9NQW8 809 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 ASNSD1Q9NWL6 643 aa16.63■□□□□ 0.25
PCYT1A-212ENST00000460677 RNF8O76064 485 aa16.62■□□□□ 0.25
PCYT1A-212ENST00000460677 PYGMP11217 842 aa16.62■□□□□ 0.25
PCYT1A-212ENST00000460677 RABGGTBP53611 331 aa16.62■□□□□ 0.25
PCYT1A-212ENST00000460677 EPHB4P54760 987 aa16.62■□□□□ 0.25
PCYT1A-212ENST00000460677 ZNF211Q13398 564 aaPredicted RBP16.62■□□□□ 0.25
PCYT1A-212ENST00000460677 SEL1L2Q5TEA6 688 aa16.62■□□□□ 0.25
PCYT1A-212ENST00000460677 ARFGAP1Q8N6T3 406 aa16.62■□□□□ 0.25
PCYT1A-212ENST00000460677 COLGALT1Q8NBJ5 622 aa16.62■□□□□ 0.25
PCYT1A-212ENST00000460677 NAP1L3Q99457 506 aaPredicted RBP16.62■□□□□ 0.25
PCYT1A-212ENST00000460677 PCDHB5Q9Y5E4 795 aa16.62■□□□□ 0.25
PCYT1A-212ENST00000460677 NLRC5Q86WI3 1866 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 SART1O43290 800 aaKnown RBP16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 HSF2BPO75031 334 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 LRCH4O75427 683 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 GJB5O95377 273 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 GLI1P08151 1106 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 DESP17661 470 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 CYP2F1P24903 491 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 SDC4P31431 198 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 PCK1P35558 622 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 NDUFV1P49821 464 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 HTRA4P83105 476 aaPredicted RBP16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 SMARCB1Q12824 385 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 HADHQ16836 314 aaKnown RBP16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 CCDC14Q49A88 953 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 TEX35Q5T0J7 233 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 GPRIN1Q7Z2K8 1008 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 KATNAL2Q8IYT4 538 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 SCML4Q8N228 414 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 HERVK_113Q902F9 699 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 TMEM169Q96HH4 297 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 VN1R3Q9BXE9 311 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 ULBP1Q9BZM6 244 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 CHST7Q9NS84 486 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 ABI2Q9NYB9 513 aaPredicted RBP16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 SPG21Q9NZD8 308 aa16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 V9GYY5 206 aaPredicted RBP16.61■□□□□ 0.25
PCYT1A-212ENST00000460677 PTPRDP23468 1912 aa16.6■□□□□ 0.25
PCYT1A-212ENST00000460677 PTPRSQ13332 1948 aa16.6■□□□□ 0.25
PCYT1A-212ENST00000460677 FGGP02679 453 aa16.6■□□□□ 0.25
PCYT1A-212ENST00000460677 SOD2P04179 222 aa16.6■□□□□ 0.25
PCYT1A-212ENST00000460677 CPB1P15086 417 aa16.6■□□□□ 0.25
PCYT1A-212ENST00000460677 TCF4P15884 667 aa16.6■□□□□ 0.25
PCYT1A-212ENST00000460677 SYN1P17600 705 aa16.6■□□□□ 0.25
PCYT1A-212ENST00000460677 GRIK1P39086 918 aa16.6■□□□□ 0.25
PCYT1A-212ENST00000460677 MAGEA11P43364 429 aa16.6■□□□□ 0.25
PCYT1A-212ENST00000460677 PTPN9P43378 593 aa16.6■□□□□ 0.25
PCYT1A-212ENST00000460677 DAOAP59103 153 aa16.6■□□□□ 0.25
PCYT1A-212ENST00000460677 C2orf54Q08AI8 447 aa16.6■□□□□ 0.25
PCYT1A-212ENST00000460677 GPR17Q13304 367 aa16.6■□□□□ 0.25
PCYT1A-212ENST00000460677 NAA30Q147X3 362 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms