RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 C2orf78A6NCI8 922 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 F8VP50 259 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 TM4SF5O14894 197 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 ABL1P00519 1130 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 ATICP31939 592 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 PDE6CP51160 858 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 NOVA1P51513 510 aaKnown RBP16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 STK4Q13043 487 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 KMT5BQ4FZB7 885 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 SCARA5Q6ZMJ2 495 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 CACNA2D4Q7Z3S7 1137 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 SYNPOQ8N3V7 929 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 KIAA0895Q8NCT3 520 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 RIN3Q8TB24 985 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 CCDC47Q96A33 483 aaKnown RBP16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 EXOC4Q96A65 974 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 SPATA17Q96L03 361 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 HHIPQ96QV1 700 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 SLC22A12Q96S37 553 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 EDEM2Q9BV94 578 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 ELOVL4Q9GZR5 314 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 DPEP3Q9H4B8 488 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 WNT6Q9Y6F9 365 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 SDK1Q7Z5N4 2213 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 ATP8B3O60423 1300 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 KLRC4O43908 158 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 TOP3BO95985 862 aaKnown RBP16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 PTPN1P18031 435 aaKnown RBP16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 HDCP19113 662 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 AP3M2P53677 418 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 ZNF252P-AS1Q0IIN9 211 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 USP4Q13107 963 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 PSMD2Q13200 908 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 ZNF77Q15935 545 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 ZNF667Q5HYK9 610 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 SH3RF2Q8TEC5 729 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 OSCP1Q8WVF1 389 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 ZNF516Q92618 1163 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 ATP2A3Q93084 1043 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 MED10Q9BTT4 135 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 SMYD3Q9H7B4 428 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 USP25Q9UHP3 1055 aa16.77■□□□□ 0.28
CHCHD3-204ENST00000457942 OTOL1A6NHN0 477 aaPredicted RBP16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 LRRIQ3A6PVS8 624 aaPredicted RBP16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 STAU1O95793 577 aaKnown RBP16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 CMA1P23946 247 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 SYKP43405 635 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 RAP1GAPP47736 663 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 USP46P62068 366 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 NCOA4Q13772 614 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 TMEM196Q5HYL7 178 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 TDRD10Q5VZ19 366 aaKnown RBP16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 CEP135Q66GS9 1140 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 B3GALNT2Q8NCR0 500 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 CEP295NLQ96MC4 621 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 P2RY13Q9BPV8 354 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 LSM14BQ9BX40 385 aaKnown RBP16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 ZNF518BQ9C0D4 1074 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 ECT2Q9H8V3 914 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 SLC8A2Q9UPR5 921 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 NME7Q9Y5B8 376 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 MYH10P35580 1976 aa16.76■□□□□ 0.27
CHCHD3-204ENST00000457942 CLDN5O00501 218 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 DCLK1O15075 740 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 CALUO43852 315 aaPredicted RBP16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 ATG13O75143 517 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 RNF40O75150 1001 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 KIF20AO95235 890 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 EGFP01133 1207 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 NR3C1P04150 777 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 RPN1P04843 607 aaKnown RBP16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 FAM163BP0C2L3 166 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 P4HA1P13674 534 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 GJA4P35212 333 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 NR1H3Q13133 447 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 FSTL4Q6MZW2 842 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 PLEKHO2Q8TD55 490 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 PARD3BQ8TEW8 1205 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 C8orf48Q96LL4 319 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 SLITRK1Q96PX8 696 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 GZF1Q9H116 711 aaPredicted RBP16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 GCNT4Q9P109 453 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 ARHGAP26Q9UNA1 814 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 FRMD4BQ9Y2L6 1034 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 ATP6V1DQ9Y5K8 247 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 EML5Q05BV3 1969 aa16.75■□□□□ 0.27
CHCHD3-204ENST00000457942 C4orf47A7E2U8 309 aa16.74■□□□□ 0.27
CHCHD3-204ENST00000457942 PDXKO00764 312 aa16.74■□□□□ 0.27
CHCHD3-204ENST00000457942 TRDMT1O14717 391 aaKnown RBP16.74■□□□□ 0.27
CHCHD3-204ENST00000457942 NFATC1O95644 943 aa16.74■□□□□ 0.27
CHCHD3-204ENST00000457942 MYL1P05976 194 aa16.74■□□□□ 0.27
CHCHD3-204ENST00000457942 DRD1P21728 446 aa16.74■□□□□ 0.27
CHCHD3-204ENST00000457942 PIK3CAP42336 1068 aa16.74■□□□□ 0.27
CHCHD3-204ENST00000457942 CDH8P55286 799 aa16.74■□□□□ 0.27
CHCHD3-204ENST00000457942 NOP14P78316 857 aaKnown RBP16.74■□□□□ 0.27
CHCHD3-204ENST00000457942 CREB5Q02930 508 aa16.74■□□□□ 0.27
CHCHD3-204ENST00000457942 PLA2G2CQ5R387 149 aa16.74■□□□□ 0.27
CHCHD3-204ENST00000457942 NAIF1Q69YI7 327 aaPredicted RBP16.74■□□□□ 0.27
CHCHD3-204ENST00000457942 CD101Q93033 1021 aa16.74■□□□□ 0.27
CHCHD3-204ENST00000457942 ELMO3Q96BJ8 720 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms