RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 CTIFO43310 598 aaKnown RBP9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 HSF2BPO75031 334 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 AP1G2O75843 785 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 TUBBP07437 444 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 ACAT1P24752 427 aaKnown RBP9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 ITGB8P26012 769 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 TKTP29401 623 aaKnown RBP9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 PCK1P35558 622 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 ZNF143P52747 638 aaPredicted RBP9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 RWDD2BP57060 319 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 BTG3Q14201 252 aaPredicted RBP9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 USP41Q3LFD5 358 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 RAB41Q5JT25 222 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 CYP4A22Q5TCH4 519 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 FAM171A1Q5VUB5 890 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 CLEC20AQ6ZU45 233 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 PAQR9Q6ZVX9 377 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 BEND5Q7L4P6 421 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 PIGZQ86VD9 579 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 CREG2Q8IUH2 290 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 SPATA2LQ8IUW3 424 aaPredicted RBP9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 RNF168Q8IYW5 571 aaPredicted RBP9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 SIX6OS1Q8N1H7 587 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 RASGEF1CQ8N431 466 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 OR10T2Q8NGX3 314 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 HASPINQ8TF76 798 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 PIK3R5Q8WYR1 880 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 IRGQQ8WZA9 623 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 GOLGA1Q92805 767 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 MYLPFQ96A32 169 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 IGSF21Q96ID5 467 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 YME1L1Q96TA2 773 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 CWH43Q9H720 699 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 LRRC4Q9HBW1 653 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 DDX56Q9NY93 547 aaKnown RBP9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 RRN3Q9NYV6 651 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 HSFX1Q9UBD0 423 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 MAFFQ9ULX9 164 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 PCDHGA10Q9Y5H3 936 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 TIMM13Q9Y5L4 95 aaPredicted RBP9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 BACE2Q9Y5Z0 518 aa9.37□□□□□ -0.91
CDC42EP3-204ENST00000457889 GOLGA6L10A0A0M3HER8 536 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 C2CD4BA6NLJ0 364 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 GOLGA8SH3BPF8 625 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 I3L4J1 428 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 TRIM66O15016 1216 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 DDX3YO15523 660 aaKnown RBP9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 PAPSS1O43252 624 aaPredicted RBP9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 NCK2O43639 380 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 ATP2C2O75185 946 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 TADA3O75528 432 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 RNF8O76064 485 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 UPP2O95045 317 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 GJB5O95377 273 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 KRT7P08729 469 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 GPD1P21695 349 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 PSMA2P25787 234 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 SSTR3P32745 418 aaPredicted RBP9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 RFC1P35251 1148 aaPredicted RBP9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 PTPN9P43378 593 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 GATMP50440 423 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 COPS2P61201 443 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 RPL7AP62424 266 aaKnown RBP9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 HTRA4P83105 476 aaPredicted RBP9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 GPR17Q13304 367 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 HADHQ16836 314 aaKnown RBP9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 CTXN3Q4LDR2 81 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 SEL1L2Q5TEA6 688 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 KIAA0319Q5VV43 1072 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 OR6B2Q6IFH4 312 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 CCDC70Q6NSX1 233 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 KCNT2Q6UVM3 1135 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 FAM183BPQ6ZVS7 135 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 VSIG1Q86XK7 387 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 KATNAL2Q8IYT4 538 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 SPPL2BQ8TCT7 592 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 MAIP1Q8WWC4 291 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 HERVK_113Q902F9 699 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 RUBCNQ92622 972 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 RABGGTAQ92696 567 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 TMEM169Q96HH4 297 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 RBM41Q96IZ5 413 aaKnown RBP9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 TBCBQ99426 244 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 HERC2P3Q9BVR0 1158 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 CARD6Q9BX69 1037 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 METTL5Q9NRN9 209 aaKnown RBP9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 COMMD8Q9NX08 183 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 SPG21Q9NZD8 308 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 MTRRQ9UBK8 725 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 TMEM59LQ9UK28 342 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 SSX2IPQ9Y2D8 614 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 RWDD3Q9Y3V2 267 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 INSL6Q9Y581 213 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 PCDHB5Q9Y5E4 795 aa9.36□□□□□ -0.91
CDC42EP3-204ENST00000457889 TMEM110-MUSTN1A8MSY1 372 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 CCDC188H7C350 402 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 HCRTO43612 131 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 TBC1D4O60343 1298 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms