RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 GRB14Q14449 540 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 STAT4Q14765 748 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 CCL14Q16627 93 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 FNBP1LQ5T0N5 605 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 RNF43Q68DV7 783 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 DPH6Q7L8W6 267 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 OTOAQ7RTW8 1153 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 MTDHQ86UE4 582 aaKnown RBP13.01□□□□□ -0.33
LINC00959-201ENST00000456581 LONP2Q86WA8 852 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 LINC01465Q8N7H1 131 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 PHC3Q8NDX5 983 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 OR6J1Q8NGC5 347 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 RFWD2Q8NHY2 731 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 PTPRN2Q92932 1015 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 SLITRK1Q96PX8 696 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 MIPEPQ99797 713 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 WDR83Q9BRX9 315 aaKnown RBP13.01□□□□□ -0.33
LINC00959-201ENST00000456581 SMYD3Q9H7B4 428 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 KANSL3Q9P2N6 904 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 MORF4L1Q9UBU8 362 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 TNFSF13BQ9Y275 285 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 HES2Q9Y543 173 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 SCN1AP35498 2009 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 DPPA5A6NC42 116 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 MMP3P08254 477 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 CD19P15391 556 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 PHKA2P46019 1235 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 GRIK4Q16099 956 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 SGSM1Q2NKQ1 1148 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 SLC10A6Q3KNW5 377 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 ZNF484Q5JVG2 852 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 ZNF677Q86XU0 584 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 SHKBP1Q8TBC3 707 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 DENND2DQ9H6A0 471 aaPredicted RBP13□□□□□ -0.33
LINC00959-201ENST00000456581 ZWILCHQ9H900 591 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 DNALI1O14645 258 aaPredicted RBP13□□□□□ -0.33
LINC00959-201ENST00000456581 STRNO43815 780 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 CD48P09326 243 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 SLC1A1P43005 524 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 HIC1Q14526 733 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 DSTYKQ6XUX3 929 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 PPP1R21Q6ZMI0 780 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 PLEKHH3Q7Z736 793 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 ANKRD23Q86SG2 305 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 KATNAL2Q8IYT4 538 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 C2orf69Q8N8R5 385 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 GBP7Q8N8V2 638 aaPredicted RBP13□□□□□ -0.33
LINC00959-201ENST00000456581 GADD45GIP1Q8TAE8 222 aaPredicted RBP13□□□□□ -0.33
LINC00959-201ENST00000456581 FBF1Q8TES7 1133 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 UCMAQ8WVF2 138 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 CCDC77Q9BR77 488 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 ZCWPW1Q9H0M4 648 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 AVENQ9NQS1 362 aaPredicted RBP13□□□□□ -0.33
LINC00959-201ENST00000456581 CYTH4Q9UIA0 394 aa13□□□□□ -0.33
LINC00959-201ENST00000456581 CLUHO75153 1309 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 B4GALT4O60513 344 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 TCEA3O75764 348 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 TNNC2P02585 160 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 GCLCP48506 637 aaPredicted RBP12.99□□□□□ -0.33
LINC00959-201ENST00000456581 DUSP28Q4G0W2 176 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 LIN9Q5TKA1 542 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 ANO7Q6IWH7 933 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 DENND1BQ6P3S1 775 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 LRRC8CQ8TDW0 803 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 ANKRD36BP1Q96IX9 119 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 SMC6Q96SB8 1091 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 NMRK2Q9NPI5 230 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 PPME1Q9Y570 386 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 CITO14578 2027 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 A0A0G2JND7 137 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 RBM47A0AV96 593 aaKnown RBP12.99□□□□□ -0.33
LINC00959-201ENST00000456581 PIK3R2O00459 728 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 CLGNO14967 610 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 GNAZP19086 355 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 HUNKP57058 714 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 ZNF200P98182 395 aaPredicted RBP12.99□□□□□ -0.33
LINC00959-201ENST00000456581 TAF5Q15542 800 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 KHDC1Q4VXA5 237 aaKnown RBP12.99□□□□□ -0.33
LINC00959-201ENST00000456581 CAPRIN2Q6IMN6 1127 aaKnown RBP12.99□□□□□ -0.33
LINC00959-201ENST00000456581 TTC7BQ86TV6 843 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 C10orf82Q8WW14 230 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 SYT15Q9BQS2 421 aa12.99□□□□□ -0.33
LINC00959-201ENST00000456581 FBXO6Q9NRD1 293 aaPredicted RBP12.99□□□□□ -0.33
LINC00959-201ENST00000456581 PRMT7Q9NVM4 692 aaPredicted RBP12.99□□□□□ -0.33
LINC00959-201ENST00000456581 PSTPIP1O43586 416 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 EDF1O60869 148 aaKnown RBP12.98□□□□□ -0.33
LINC00959-201ENST00000456581 MMP8P22894 467 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 INHBEP58166 350 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 SPARCL1Q14515 664 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 SETDB1Q15047 1291 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 SYDE1Q6ZW31 735 aaPredicted RBP12.98□□□□□ -0.33
LINC00959-201ENST00000456581 ALLCQ8N6M5 410 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 FEZF2Q8TBJ5 459 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 NAF1Q96HR8 494 aaKnown RBP12.98□□□□□ -0.33
LINC00959-201ENST00000456581 TSPAN1O60635 241 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 MAP3K6O95382 1288 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 TPBGLP0DKB5 382 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 POLR2BP30876 1174 aaKnown RBP12.98□□□□□ -0.33
LINC00959-201ENST00000456581 MAN1A1P33908 653 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 CAV1Q03135 178 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms