RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 EBF3Q9H4W6 596 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 FAM124BQ9H5Z6 455 aaPredicted RBP18.97■□□□□ 0.63
MSH6-207ENST00000456246 HPS4Q9NQG7 708 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 PCDHA5Q9Y5H7 936 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 PRCPP42785 496 aa18.96■□□□□ 0.63
MSH6-207ENST00000456246 MXI1P50539 228 aa18.96■□□□□ 0.63
MSH6-207ENST00000456246 SLC7A9P82251 487 aa18.96■□□□□ 0.63
MSH6-207ENST00000456246 FKBP3Q00688 224 aaKnown RBP18.96■□□□□ 0.63
MSH6-207ENST00000456246 TAF10Q12962 218 aa18.96■□□□□ 0.63
MSH6-207ENST00000456246 SPOPLQ6IQ16 392 aa18.96■□□□□ 0.63
MSH6-207ENST00000456246 ACOT1Q86TX2 421 aa18.96■□□□□ 0.63
MSH6-207ENST00000456246 ZBTB44Q8NCP5 570 aa18.96■□□□□ 0.63
MSH6-207ENST00000456246 TTC8Q8TAM2 541 aa18.96■□□□□ 0.63
MSH6-207ENST00000456246 TAS1R2Q8TE23 839 aa18.96■□□□□ 0.63
MSH6-207ENST00000456246 SH3RF2Q8TEC5 729 aa18.96■□□□□ 0.63
MSH6-207ENST00000456246 SLC22A12Q96S37 553 aa18.96■□□□□ 0.63
MSH6-207ENST00000456246 DUS2Q9NX74 493 aaKnown RBP18.96■□□□□ 0.63
MSH6-207ENST00000456246 HELZP42694 1942 aaKnown RBP18.96■□□□□ 0.63
MSH6-207ENST00000456246 PSMA7O14818 248 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 AP1G2O75843 785 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 PAPSS2O95340 614 aaPredicted RBP18.95■□□□□ 0.62
MSH6-207ENST00000456246 OLFM2O95897 454 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 CXCL12P48061 93 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 CACNA2D1P54289 1103 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 GRSF1Q12849 480 aaKnown RBP eCLIP18.95■□□□□ 0.62
MSH6-207ENST00000456246 NR1H3Q13133 447 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 CCINQ13939 588 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 PON2Q15165 354 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 TRIM68Q6AZZ1 485 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 PAQR9Q6ZVX9 377 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 DDX42Q86XP3 938 aaKnown RBP eCLIP18.95■□□□□ 0.62
MSH6-207ENST00000456246 FUKQ8N0W3 1084 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 ADSSL1Q8N142 457 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 RIN3Q8TB24 985 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 FBXO32Q969P5 355 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 CYP2S1Q96SQ9 504 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 NT5C1AQ9BXI3 368 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 MMRN2Q9H8L6 949 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 CSNK1G1Q9HCP0 422 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 KRT82Q9NSB4 513 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 TMEM30AQ9NV96 361 aa18.95■□□□□ 0.62
MSH6-207ENST00000456246 EP300Q09472 2414 aaPredicted RBP18.95■□□□□ 0.62
MSH6-207ENST00000456246 TRDMT1O14717 391 aaKnown RBP18.94■□□□□ 0.62
MSH6-207ENST00000456246 OAS1P00973 400 aaKnown RBP18.94■□□□□ 0.62
MSH6-207ENST00000456246 TUBP50607 506 aa18.94■□□□□ 0.62
MSH6-207ENST00000456246 SLC5A3P53794 718 aa18.94■□□□□ 0.62
MSH6-207ENST00000456246 TMEM196Q5HYL7 178 aa18.94■□□□□ 0.62
MSH6-207ENST00000456246 ZC3H3Q8IXZ2 948 aaKnown RBP18.94■□□□□ 0.62
MSH6-207ENST00000456246 FBXL13Q8NEE6 735 aa18.94■□□□□ 0.62
MSH6-207ENST00000456246 SLC2A14Q8TDB8 520 aa18.94■□□□□ 0.62
MSH6-207ENST00000456246 FBXO44Q9H4M3 255 aa18.94■□□□□ 0.62
MSH6-207ENST00000456246 ECT2Q9H8V3 914 aa18.94■□□□□ 0.62
MSH6-207ENST00000456246 APOBEC3GQ9HC16 384 aaKnown RBP18.94■□□□□ 0.62
MSH6-207ENST00000456246 PNPLA8Q9NP80 782 aa18.94■□□□□ 0.62
MSH6-207ENST00000456246 IL37Q9NZH6 218 aa18.94■□□□□ 0.62
MSH6-207ENST00000456246 OTOGLQ3ZCN5 2332 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 FAM92AA1XBS5 289 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 SLC9A3R1O14745 358 aaPredicted RBP18.93■□□□□ 0.62
MSH6-207ENST00000456246 TNFRSF10BO14763 440 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 LILRB5O75023 590 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 CILPO75339 1184 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 NFATC1O95644 943 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 ABL1P00519 1130 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 FAM200BP0CF97 657 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 ARSAP15289 507 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 IFRD2Q12894 506 aaPredicted RBP18.93■□□□□ 0.62
MSH6-207ENST00000456246 EML3Q32P44 896 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 FBXO43Q4G163 708 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 SNX30Q5VWJ9 437 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 ELMO3Q96BJ8 720 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 DHTKD1Q96HY7 919 aaPredicted RBP18.93■□□□□ 0.62
MSH6-207ENST00000456246 KCNK16Q96T55 309 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 HNRNPABQ99729 332 aaKnown RBP18.93■□□□□ 0.62
MSH6-207ENST00000456246 RAB20Q9NX57 234 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 HMGXB4Q9UGU5 601 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 WNT6Q9Y6F9 365 aa18.93■□□□□ 0.62
MSH6-207ENST00000456246 LEFTY2O00292 366 aa18.92■□□□□ 0.62
MSH6-207ENST00000456246 ATG13O75143 517 aa18.92■□□□□ 0.62
MSH6-207ENST00000456246 TDGF1P13385 188 aa18.92■□□□□ 0.62
MSH6-207ENST00000456246 CCDC130P13994 396 aa18.92■□□□□ 0.62
MSH6-207ENST00000456246 DRD1P21728 446 aa18.92■□□□□ 0.62
MSH6-207ENST00000456246 GAS6Q14393 721 aa18.92■□□□□ 0.62
MSH6-207ENST00000456246 WDR44Q5JSH3 913 aa18.92■□□□□ 0.62
MSH6-207ENST00000456246 HECTD3Q5T447 861 aa18.92■□□□□ 0.62
MSH6-207ENST00000456246 FOXR2Q6PJQ5 311 aa18.92■□□□□ 0.62
MSH6-207ENST00000456246 TTC16Q8NEE8 873 aa18.92■□□□□ 0.62
MSH6-207ENST00000456246 CCDC26Q8TAB7 109 aa18.92■□□□□ 0.62
MSH6-207ENST00000456246 EPC1Q9H2F5 836 aa18.92■□□□□ 0.62
MSH6-207ENST00000456246 RBM12Q9NTZ6 932 aaKnown RBP18.92■□□□□ 0.62
MSH6-207ENST00000456246 FAM49BQ9NUQ9 324 aa18.92■□□□□ 0.62
MSH6-207ENST00000456246 ARMCX3Q9UH62 379 aaPredicted RBP18.92■□□□□ 0.62
MSH6-207ENST00000456246 CPQQ9Y646 472 aa18.92■□□□□ 0.62
MSH6-207ENST00000456246 OTOL1A6NHN0 477 aaPredicted RBP18.91■□□□□ 0.62
MSH6-207ENST00000456246 GJA4P35212 333 aa18.91■□□□□ 0.62
MSH6-207ENST00000456246 SATB1Q01826 763 aa18.91■□□□□ 0.62
MSH6-207ENST00000456246 DCAF17Q5H9S7 520 aaPredicted RBP18.91■□□□□ 0.62
MSH6-207ENST00000456246 TCERG1LQ5VWI1 586 aa18.91■□□□□ 0.62
MSH6-207ENST00000456246 ANKRD40Q6AI12 368 aa18.91■□□□□ 0.62
MSH6-207ENST00000456246 TSSK4Q6SA08 328 aa18.91■□□□□ 0.62
MSH6-207ENST00000456246 Q6ZS52 159 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms