RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 SLC4A11Q8NBS3 891 aa12.57□□□□□ -0.4
TMEM56-202ENST00000455656 SCAMP5Q8TAC9 235 aa12.57□□□□□ -0.4
TMEM56-202ENST00000455656 SMARCD1Q96GM5 515 aa12.57□□□□□ -0.4
TMEM56-202ENST00000455656 HNRNPABQ99729 332 aaKnown RBP12.57□□□□□ -0.4
TMEM56-202ENST00000455656 NT5C1AQ9BXI3 368 aa12.57□□□□□ -0.4
TMEM56-202ENST00000455656 METTL14Q9HCE5 456 aaKnown RBP12.57□□□□□ -0.4
TMEM56-202ENST00000455656 TRPC7Q9HCX4 862 aa12.57□□□□□ -0.4
TMEM56-202ENST00000455656 DMAP1Q9NPF5 467 aaPredicted RBP12.57□□□□□ -0.4
TMEM56-202ENST00000455656 KRT82Q9NSB4 513 aa12.57□□□□□ -0.4
TMEM56-202ENST00000455656 CISHQ9NSE2 258 aa12.57□□□□□ -0.4
TMEM56-202ENST00000455656 LMBRD1Q9NUN5 540 aa12.57□□□□□ -0.4
TMEM56-202ENST00000455656 CLSTN1O94985 981 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 USP17L7P0C7H9 530 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 ZDHHC11BP0C7U3 371 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 CHRNB1P11230 501 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 PFKLP17858 780 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 CTHP32929 405 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 SLC5A3P53794 718 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 RAD23BP54727 409 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 PLCB2Q00722 1185 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 PAK1Q13153 545 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 PPP1R26Q5T8A7 1209 aaPredicted RBP12.56□□□□□ -0.4
TMEM56-202ENST00000455656 SNX30Q5VWJ9 437 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 TRIM68Q6AZZ1 485 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 GPRIN1Q7Z2K8 1008 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 TRIM59Q8IWR1 403 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 YAF2Q8IY57 180 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 FAM3CQ92520 227 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 MED10Q9BTT4 135 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 CLSTN2Q9H4D0 955 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 GKN1Q9NS71 199 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 TRPM5Q9NZQ8 1165 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 ARHGAP26Q9UNA1 814 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 ATP8B3O60423 1300 aa12.56□□□□□ -0.4
TMEM56-202ENST00000455656 MYOFQ9NZM1 2061 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 TRAV19A0A0A6YYK7 116 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 BICDL2A1A5D9 508 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 SPECC1L-ADORA2AF8WAN1 911 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 MAN2B1O00754 1011 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 RTN3O95197 1032 aaPredicted RBP12.55□□□□□ -0.4
TMEM56-202ENST00000455656 HDCP19113 662 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 RFX1P22670 979 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 YWHAQP27348 245 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 ADORA2BP29275 332 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 RPS9P46781 194 aaKnown RBP12.55□□□□□ -0.4
TMEM56-202ENST00000455656 PPP3CCP48454 512 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 MAP3K7CLP57077 242 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 SLC7A9P82251 487 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 IFRD2Q12894 506 aaPredicted RBP12.55□□□□□ -0.4
TMEM56-202ENST00000455656 GAS6Q14393 721 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 MTF1Q14872 753 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 ZNF394Q53GI3 561 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 C1orf210Q8IVY1 113 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 TTC8Q8TAM2 541 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 OVCA2Q8WZ82 227 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 CYFIP2Q96F07 1278 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 MSANTD3Q96H12 275 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 ZFRQ96KR1 1074 aaKnown RBP12.55□□□□□ -0.4
TMEM56-202ENST00000455656 NELL2Q99435 816 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 FAM124BQ9H5Z6 455 aaPredicted RBP12.55□□□□□ -0.4
TMEM56-202ENST00000455656 C8orf33Q9H7E9 229 aaPredicted RBP12.55□□□□□ -0.4
TMEM56-202ENST00000455656 COMMD8Q9NX08 183 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 EHD2Q9NZN4 543 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 VPS13AQ96RL7 3174 aa12.55□□□□□ -0.4
TMEM56-202ENST00000455656 PROB1E7EW31 1015 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 CKMP06732 381 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 ARSAP15289 507 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 ACO1P21399 889 aaKnown RBP12.54□□□□□ -0.4
TMEM56-202ENST00000455656 NBL1P41271 181 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 MAGEA9P43362 315 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 CUL2Q13617 745 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 RUNX3Q13761 415 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 EML3Q32P44 896 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 CCDC40Q4G0X9 1142 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 ARHGAP17Q68EM7 881 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 ALYREFQ86V81 257 aaKnown RBP12.54□□□□□ -0.4
TMEM56-202ENST00000455656 RALGPS2Q86X27 583 aaPredicted RBP12.54□□□□□ -0.4
TMEM56-202ENST00000455656 IRF2BP1Q8IU81 584 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 CCDC150Q8NCX0 1101 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 CSGALNACT1Q8TDX6 532 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 SH3RF2Q8TEC5 729 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 KAT5Q92993 513 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 FBXO32Q969P5 355 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 TMEM176AQ96HP8 235 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 SLITRK1Q96PX8 696 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 SRRTQ9BXP5 876 aaKnown RBP12.54□□□□□ -0.4
TMEM56-202ENST00000455656 IRF2BPLQ9H1B7 796 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 CHRDQ9H2X0 955 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 EBF3Q9H4W6 596 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 PNPLA8Q9NP80 782 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 GMIPQ9P107 970 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 CHORDC1Q9UHD1 332 aaPredicted RBP12.54□□□□□ -0.4
TMEM56-202ENST00000455656 RWDD2AQ9UIY3 292 aa12.54□□□□□ -0.4
TMEM56-202ENST00000455656 NDRG2Q9UN36 371 aaKnown RBP12.54□□□□□ -0.4
TMEM56-202ENST00000455656 LEFTY2O00292 366 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 COCHO43405 550 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 FAM200BP0CF97 657 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 TDGF1P13385 188 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 MRE11P49959 708 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 KCNH2Q12809 1159 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms