RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TTC9BQ8N6N2 239 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 SUMF1Q8NBK3 374 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 APPL2Q8NEU8 664 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 RASSF8Q8NHQ8 419 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 ZSCAN18Q8TBC5 510 aaPredicted RBP5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 RAD54LQ92698 747 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 ELSPBP1Q96BH3 223 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 RSPRY1Q96DX4 576 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 FAM84AQ96KN4 292 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 SENP8Q96LD8 212 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 LRRC3BQ96PB8 259 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 FIZ1Q96SL8 496 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 MSTO1Q9BUK6 570 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 TRMT61BQ9BVS5 477 aaKnown RBP5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 TIPINQ9BVW5 301 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 LRRC3Q9BY71 257 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 CLEC4MQ9H2X3 399 aaPredicted RBP5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 BRD9Q9H8M2 597 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 LMAN1LQ9HAT1 526 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 PLEKHA5Q9HAU0 1116 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 PARVGQ9HBI0 331 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 CAPN10Q9HC96 672 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 ZNF334Q9HCZ1 680 aaPredicted RBP5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 GDE1Q9NZC3 331 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 FRRS1LQ9P0K9 344 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 AFF4Q9UHB7 1163 aaKnown RBP5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 KCNG1Q9UIX4 513 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 PPM1HQ9ULR3 514 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 UBQLN1Q9UMX0 589 aaKnown RBP5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 TLR6Q9Y2C9 796 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 KIF3AQ9Y496 699 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 GPR179Q6PRD1 2367 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 OTOGLQ3ZCN5 2332 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 GON4LQ3T8J9 2241 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 SPAG17Q6Q759 2223 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 ABCA7Q8IZY2 2146 aa5.08□□□□□ -1.6
GTF3C3-208ENST00000455546 CFAP54Q96N23 3096 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 A0A0B4J269 797 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 VPS37CA5D8V6 355 aaPredicted RBP5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 GOLGA8IPA6NC78 632 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 MYMKA6NI61 221 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 GOLGA8JA6NMD2 632 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 HEPACAM2A8MVW5 462 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 LINC01387J3KSC0 135 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 PIRO00625 290 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 CYB561D2O14569 222 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ZNF197O14709 1029 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ZNF263O14978 683 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 OGTO15294 1046 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 OIP5O43482 229 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 CENPBP07199 599 aaPredicted RBP5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ADRB2P07550 413 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 PSMC3P17980 439 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 CYP3A5P20815 502 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 CCNE1P24864 410 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ADSSP30520 456 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 LRPAP1P30533 357 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 LONP1P36776 959 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ALDH1A3P47895 512 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 SOX9P48436 509 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 AARSP49588 968 aaKnown RBP eCLIP5.07□□□□□ -1.62e-7■■□□□ 13.7
GTF3C3-208ENST00000455546 GTF2BQ00403 316 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 PFKPQ01813 784 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 FAM160A1Q05DH4 1040 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 GPR17Q13304 367 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 PTPAQ15257 358 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 LPAL2Q16609 132 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 SLC39A12Q504Y0 691 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 SDHAF4Q5VUM1 108 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 SPATA1Q5VX52 437 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 C9orf57Q5W0N0 161 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 WSCD1Q658N2 575 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ADALQ6DHV7 355 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 CENPPQ6IPU0 288 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 CRELD2Q6UXH1 353 aaPredicted RBP5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ZNF852Q6ZMS4 543 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 C20orf204Q6ZNR8 217 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 GAREM2Q75VX8 874 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ZNF720Q7Z2F6 126 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ERMP1Q7Z2K6 904 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 SFR1Q86XK3 245 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 MAP4K3Q8IVH8 894 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ARID3BQ8IVW6 561 aaPredicted RBP5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 STKLD1Q8NE28 680 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 BEST2Q8NFU1 509 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 OR10T2Q8NGX3 314 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 SHKBP1Q8TBC3 707 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 STK35Q8TDR2 534 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ATRIPQ8WXE1 791 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 FAM3CQ92520 227 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 LARP4BQ92615 738 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 SMARCD2Q92925 531 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 CLDN23Q96B33 292 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 RMDN1Q96DB5 314 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ZFYVE19Q96K21 471 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 BTBD6Q96KE9 485 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 AK8Q96MA6 479 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 NELL2Q99435 816 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 PYM1Q9BRP8 204 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms