RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SERPINB6P35237 376 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 TTLL4Q14679 1199 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 NFIL3Q16649 462 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 JADE1Q6IE81 842 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 NUDCD3Q8IVD9 361 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.65□□□□□ -0.54
DDR1-240ENST00000454612 MECRQ9BV79 373 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 KLHL8Q9P2G9 620 aaPredicted RBP11.65□□□□□ -0.54
DDR1-240ENST00000454612 HMGXB4Q9UGU5 601 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 NUDT5Q9UKK9 219 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 USP18Q9UMW8 372 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 H0YGN5 161 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 HCRTO43612 131 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 RASSF9O75901 435 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 ARL4AP40617 200 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 ATXN1P54253 815 aaKnown RBP11.65□□□□□ -0.54
DDR1-240ENST00000454612 GDF10P55107 478 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 NCKAP1LP55160 1127 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 GCNT1Q02742 428 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 DEUP1Q05D60 604 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 CCNG2Q16589 344 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 NDUFAF2Q8N183 169 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 RYBPQ8N488 228 aaPredicted RBP11.65□□□□□ -0.54
DDR1-240ENST00000454612 PPP4R1Q8TF05 950 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 SNRNP27Q8WVK2 155 aaKnown RBP11.65□□□□□ -0.54
DDR1-240ENST00000454612 SERPINB12Q96P63 405 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 IFT122Q9HBG6 1241 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 SNTG2Q9NY99 539 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 NFS1Q9Y697 457 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 KCNK1O00180 336 aa11.65□□□□□ -0.55
DDR1-240ENST00000454612 SNX3O60493 162 aa11.65□□□□□ -0.55
DDR1-240ENST00000454612 MYL3P08590 195 aa11.65□□□□□ -0.55
DDR1-240ENST00000454612 EPHB2P29323 1055 aa11.65□□□□□ -0.55
DDR1-240ENST00000454612 COPS2P61201 443 aa11.65□□□□□ -0.55
DDR1-240ENST00000454612 RAB6CQ53S08 254 aa11.65□□□□□ -0.55
DDR1-240ENST00000454612 TAF1BQ53T94 588 aaPredicted RBP11.65□□□□□ -0.55
DDR1-240ENST00000454612 CD302Q8IX05 232 aa11.65□□□□□ -0.55
DDR1-240ENST00000454612 SGF29Q96ES7 293 aa11.65□□□□□ -0.55
DDR1-240ENST00000454612 FGD4Q96M96 766 aa11.65□□□□□ -0.55
DDR1-240ENST00000454612 RAB6CQ9H0N0 254 aa11.65□□□□□ -0.55
DDR1-240ENST00000454612 GPRC5DQ9NZD1 345 aa11.65□□□□□ -0.55
DDR1-240ENST00000454612 PCYOX1Q9UHG3 505 aa11.65□□□□□ -0.55
DDR1-240ENST00000454612 MYH4Q9Y623 1939 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 LTBP1Q14766 1721 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 HAUS5O94927 633 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 VNN1O95497 513 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 CETPP11597 493 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 TNFRSF8P28908 595 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 TPP2P29144 1249 aaPredicted RBP11.64□□□□□ -0.55
DDR1-240ENST00000454612 ADCYAP1R1P41586 468 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 FAAP100Q0VG06 881 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 MPP2Q14168 576 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 PTPN20Q4JDL3 420 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 DENND5BQ6ZUT9 1274 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 FAM172AQ8WUF8 416 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 ART4Q93070 314 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 CPXM1Q96SM3 734 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 TSSK1BQ9BXA7 367 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 PORCNQ9H237 461 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 DLGAP2Q9P1A6 1054 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 WHRNQ9P202 907 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 BTBD7Q9P203 1132 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 EME2A4GXA9 379 aaPredicted RBP11.64□□□□□ -0.55
DDR1-240ENST00000454612 KBTBD13C9JR72 458 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 PTPN11Q06124 597 aaPredicted RBP11.64□□□□□ -0.55
DDR1-240ENST00000454612 PIGHQ14442 188 aaPredicted RBP11.64□□□□□ -0.55
DDR1-240ENST00000454612 TRIM72Q6ZMU5 477 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 RAB3IL1Q8TBN0 382 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 CCHCR1Q8TD31 782 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 PGBD4Q96DM1 585 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 RNPEPQ9H4A4 650 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 GOLGA2P5Q9HBQ8 144 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 PSMC3IPQ9P2W1 217 aaPredicted RBP11.64□□□□□ -0.55
DDR1-240ENST00000454612 TSPAN16Q9UKR8 245 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 CNTNAP1P78357 1384 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 FSCN2O14926 492 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 CIB2O75838 187 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 DGKIO75912 1065 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 KRT16P08779 473 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 NQO1P15559 274 aaKnown RBP11.64□□□□□ -0.55
DDR1-240ENST00000454612 RBL1P28749 1068 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 EFNA5P52803 228 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 KBTBD12Q3ZCT8 623 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 SH2D4BQ5SQS7 431 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 HEATR6Q6AI08 1181 aaKnown RBP11.64□□□□□ -0.55
DDR1-240ENST00000454612 ABHD15Q6UXT9 468 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 AGAP11Q8TF27 550 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 LENG1Q96BZ8 264 aaPredicted RBP11.64□□□□□ -0.55
DDR1-240ENST00000454612 RMI1Q9H9A7 625 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 FBXO6Q9NRD1 293 aaPredicted RBP11.64□□□□□ -0.55
DDR1-240ENST00000454612 SLC17A7Q9P2U7 560 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 ARFGEF1Q9Y6D6 1849 aa11.64□□□□□ -0.55
DDR1-240ENST00000454612 IQANK1A0A1B0GTG1 560 aa11.63□□□□□ -0.55
DDR1-240ENST00000454612 BTNL10A8MVZ5 291 aa11.63□□□□□ -0.55
DDR1-240ENST00000454612 C19orf81C9J6K1 198 aa11.63□□□□□ -0.55
DDR1-240ENST00000454612 H3BRJ5 948 aa11.63□□□□□ -0.55
DDR1-240ENST00000454612 HMGCRP04035 888 aa11.63□□□□□ -0.55
DDR1-240ENST00000454612 USP4Q13107 963 aa11.63□□□□□ -0.55
DDR1-240ENST00000454612 SLC1A5Q15758 541 aa11.63□□□□□ -0.55
DDR1-240ENST00000454612 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms