RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 HADHQ16836 314 aaKnown RBP12.65□□□□□ -0.38
COL27A1-202ENST00000451716 GKAP1Q5VSY0 366 aaPredicted RBP12.65□□□□□ -0.38
COL27A1-202ENST00000451716 OR6B2Q6IFH4 312 aa12.65□□□□□ -0.38
COL27A1-202ENST00000451716 VSTM1Q6UX27 236 aa12.65□□□□□ -0.38
COL27A1-202ENST00000451716 MICALCLQ6ZW33 695 aa12.65□□□□□ -0.38
COL27A1-202ENST00000451716 CROCCP2Q86T23 111 aa12.65□□□□□ -0.38
COL27A1-202ENST00000451716 IFNLR1Q8IU57 520 aaPredicted RBP12.65□□□□□ -0.38
COL27A1-202ENST00000451716 CACNA2D3Q8IZS8 1091 aa12.65□□□□□ -0.38
COL27A1-202ENST00000451716 BBOF1Q8ND07 529 aa12.65□□□□□ -0.38
COL27A1-202ENST00000451716 NPLOC4Q8TAT6 608 aa12.65□□□□□ -0.38
COL27A1-202ENST00000451716 GDAP1Q8TB36 358 aa12.65□□□□□ -0.38
COL27A1-202ENST00000451716 C18orf25Q96B23 403 aaPredicted RBP12.65□□□□□ -0.38
COL27A1-202ENST00000451716 CENPTQ96BT3 561 aa12.65□□□□□ -0.38
COL27A1-202ENST00000451716 MAML3Q96JK9 1138 aa12.65□□□□□ -0.38
COL27A1-202ENST00000451716 PEBP4Q96S96 227 aa12.65□□□□□ -0.38
COL27A1-202ENST00000451716 TPX2Q9ULW0 747 aaKnown RBP12.65□□□□□ -0.38
COL27A1-202ENST00000451716 BARX2Q9UMQ3 279 aaPredicted RBP12.65□□□□□ -0.38
COL27A1-202ENST00000451716 SNX9Q9Y5X1 595 aa12.65□□□□□ -0.38
COL27A1-202ENST00000451716 GLTPD2A6NH11 291 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 DYNC1LI2O43237 492 aaPredicted RBP12.64□□□□□ -0.39
COL27A1-202ENST00000451716 RBP5P82980 135 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 ATP11AP98196 1134 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 ACVR2BQ13705 512 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 THEMIS2Q5TEJ8 643 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 ANKRD22Q5VYY1 191 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 DRICH1Q6PGQ1 229 aaPredicted RBP12.64□□□□□ -0.39
COL27A1-202ENST00000451716 NPNTQ6UXI9 565 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 POLNQ7Z5Q5 900 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 ACOT1Q86TX2 421 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 RFX6Q8HWS3 928 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 ANKMY2Q8IV38 441 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 ZBED8Q8IZ13 594 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 SLC35B2Q8TB61 432 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 DYDC1Q8WWB3 177 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 OSMRQ99650 979 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 MRPL45Q9BRJ2 306 aaKnown RBP12.64□□□□□ -0.39
COL27A1-202ENST00000451716 TUBGCP4Q9UGJ1 667 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 USP18Q9UMW8 372 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 CITO14578 2027 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 POC1B-GALNT4F8VUJ3 575 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 KRT7P08729 469 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 VDRP11473 427 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 P4HA1P13674 534 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 HOXA11P31270 313 aaPredicted RBP12.64□□□□□ -0.39
COL27A1-202ENST00000451716 ATICP31939 592 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 ZNF268Q14587 947 aaPredicted RBP12.64□□□□□ -0.39
COL27A1-202ENST00000451716 TMED2Q15363 201 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 FAM183BPQ6ZVS7 135 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 CCDC13Q8IYE1 715 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 LRRN4Q8WUT4 740 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 NKD2Q969F2 451 aaPredicted RBP12.64□□□□□ -0.39
COL27A1-202ENST00000451716 ELAC2Q9BQ52 826 aaKnown RBP12.64□□□□□ -0.39
COL27A1-202ENST00000451716 NME7Q9Y5B8 376 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 CAPN7Q9Y6W3 813 aa12.64□□□□□ -0.39
COL27A1-202ENST00000451716 PLXNB2O15031 1838 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 C5orf60A6NFR6 353 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 SMAPO00193 183 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 RNF8O76064 485 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 MAP3K6O95382 1288 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 ITGAVP06756 1048 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 PFKMP08237 780 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 BRAFP15056 766 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 PDGFRAP16234 1089 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 AKAP5P24588 427 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 DUSP28Q4G0W2 176 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 PPP1R26Q5T8A7 1209 aaPredicted RBP12.63□□□□□ -0.39
COL27A1-202ENST00000451716 RNASEH2BQ5TBB1 312 aaKnown RBP12.63□□□□□ -0.39
COL27A1-202ENST00000451716 UNC45BQ8IWX7 931 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 RXFP2Q8WXD0 754 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 MCRS1Q96EZ8 462 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 CFAP57Q96MR6 1250 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 PTPN18Q99952 460 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 TINF2Q9BSI4 451 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 OSBPL7Q9BZF2 842 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 VPS37BQ9H9H4 285 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 CYP3A43Q9HB55 503 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 ITGA11Q9UKX5 1188 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 DRG1Q9Y295 367 aaKnown RBP12.63□□□□□ -0.39
COL27A1-202ENST00000451716 DOCK3Q8IZD9 2030 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 TCRBV7S3A2A0A539 114 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 STRNO43815 780 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 HMGCRP04035 888 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 CTCFP49711 727 aaPredicted RBP12.63□□□□□ -0.39
COL27A1-202ENST00000451716 PDIA2Q13087 525 aaKnown RBP12.63□□□□□ -0.39
COL27A1-202ENST00000451716 DGKDQ16760 1214 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 GOLGA7BQ2TAP0 167 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 CATSPER4Q7RTX7 472 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 ZC3H18Q86VM9 953 aaKnown RBP12.63□□□□□ -0.39
COL27A1-202ENST00000451716 SCUBE3Q8IX30 993 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 NME8Q8N427 588 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 FAM71DQ8N9W8 422 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 FNIP1Q8TF40 1166 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 C17orf50Q8WW18 174 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 EMID1Q96A84 441 aaPredicted RBP12.63□□□□□ -0.39
COL27A1-202ENST00000451716 NT5C1AQ9BXI3 368 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 B3GNT5Q9BYG0 378 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 VRTNQ9H8Y1 702 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.63□□□□□ -0.39
COL27A1-202ENST00000451716 GPATCH2LQ9NWQ4 482 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 WDR35Q9P2L0 1181 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms