RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 PCK1P35558 622 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 FCGRTP55899 365 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 HTRA3P83110 453 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 RNASEH2BQ5TBB1 312 aaKnown RBP6.93□□□□□ -1.3
USP46-202ENST00000451218 TAF2Q6P1X5 1199 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 RHOT1Q8IXI2 618 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 SMC1BQ8NDV3 1235 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 CD99L2Q8TCZ2 262 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 OLFM3Q96PB7 478 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 KATNAL1Q9BW62 490 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 OSBPL8Q9BZF1 889 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 KLC2Q9H0B6 622 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 SEMA4AQ9H3S1 761 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 PADI3Q9ULW8 664 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 KIF26AQ9ULI4 1882 aaPredicted RBP6.93□□□□□ -1.3
USP46-202ENST00000451218 C9IYK1 514 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 NRP1O14786 923 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 ERLIN2O94905 339 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 C6orf222P0C671 652 aaPredicted RBP6.93□□□□□ -1.3
USP46-202ENST00000451218 CKBP12277 381 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 ABL2P42684 1182 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 MAGEA3P43357 314 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 CDC42EP1Q00587 391 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 FASTKD3Q14CZ7 662 aaKnown RBP6.93□□□□□ -1.3
USP46-202ENST00000451218 SMTNL2Q2TAL5 461 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 IFT20Q8IY31 132 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 TOP6BLQ8N6T0 577 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 TMEM35BQ8NCS4 154 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 CAPNS2Q96L46 248 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 DDX23Q9BUQ8 820 aaKnown RBP6.93□□□□□ -1.3
USP46-202ENST00000451218 PAK6Q9NQU5 681 aaPredicted RBP6.93□□□□□ -1.3
USP46-202ENST00000451218 PCDH10Q9P2E7 1040 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 HCSTQ9UBK5 93 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 DDX20Q9UHI6 824 aaKnown RBP6.93□□□□□ -1.3
USP46-202ENST00000451218 EFR3BQ9Y2G0 817 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 A0A0U1RQF3 1178 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 FOXO6A8MYZ6 492 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 TNFRSF10BO14763 440 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 DDHD2O94830 711 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 LINC00271P0C7V0 271 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 CD52P31358 61 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 SCNN1AP37088 669 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 PAFAH1B1P43034 410 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 NDUFV1P49821 464 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 ACLYP53396 1101 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 ANKRD22Q5VYY1 191 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 CATSPER4Q7RTX7 472 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 PLPP6Q8IY26 295 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 PXYLP1Q8TE99 480 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 HNRNPABQ99729 332 aaKnown RBP6.92□□□□□ -1.3
USP46-202ENST00000451218 TMEM109Q9BVC6 243 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 NT5C1AQ9BXI3 368 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 ARGLU1Q9NWB6 273 aaPredicted RBP6.92□□□□□ -1.3
USP46-202ENST00000451218 A0A1W2PQ45 241 aaPredicted RBP6.92□□□□□ -1.3
USP46-202ENST00000451218 A0A1W2PQY0 241 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 M0QYV0 167 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 TBC1D4O60343 1298 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 KRT19P08727 400 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 TNNC1P63316 161 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 KRT17Q04695 432 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 TIGD5Q53EQ6 642 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 ZC3H12AQ5D1E8 599 aaKnown RBP6.92□□□□□ -1.3
USP46-202ENST00000451218 BBS12Q6ZW61 710 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 SLC26A9Q7LBE3 791 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 SCUBE3Q8IX30 993 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 RNF168Q8IYW5 571 aaPredicted RBP6.92□□□□□ -1.3
USP46-202ENST00000451218 CCDC185Q8N715 623 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 PCDH19Q8TAB3 1148 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 KCTD13Q8WZ19 329 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 HEMGNQ9BXL5 484 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 MED4Q9NPJ6 270 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 XPNPEP3Q9NQH7 507 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 FAM49BQ9NUQ9 324 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 WHRNQ9P202 907 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 UBQLN1Q9UMX0 589 aaKnown RBP6.92□□□□□ -1.3
USP46-202ENST00000451218 SNX24Q9Y343 169 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 SNX9Q9Y5X1 595 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 CLUHO75153 1309 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 DMDP11532 3685 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 MIA3Q5JRA6 1907 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 ZNF487B1APH4 448 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 RIPK2O43353 540 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 ITGAVP06756 1048 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 L1CAMP32004 1257 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 PTK7Q13308 1070 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 PIGHQ14442 188 aaPredicted RBP6.92□□□□□ -1.3
USP46-202ENST00000451218 TFDP3Q5H9I0 405 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 GNASQ5JWF2 1037 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 NPNTQ6UXI9 565 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 LRIG3Q6UXM1 1119 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 SH2D5Q6ZV89 423 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 NAT8LQ8N9F0 302 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 ANKRD52Q8NB46 1076 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 BCL7CQ8WUZ0 217 aaPredicted RBP6.92□□□□□ -1.3
USP46-202ENST00000451218 DHRS4Q9BTZ2 278 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 VN1R3Q9BXE9 311 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 CHST12Q9NRB3 414 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 RGS18Q9NS28 235 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 PLAAQ9Y263 795 aa6.92□□□□□ -1.3
USP46-202ENST00000451218 E7ESA3 106 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms