RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 TMEM206Q9H813 350 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 IL21RQ9HBE5 538 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.56□□□□□ -1.04
LINC01961-201ENST00000449954 WNT6Q9Y6F9 365 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 ITPR3Q14573 2671 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 DENND4CQ5VZ89 1909 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 MYMKA6NI61 221 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 MEI4A8MW99 385 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 M0QZQ0 153 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 EML1O00423 815 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 ACKR2O00590 384 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 ADAMTS3O15072 1205 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 TRAK2O60296 914 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 BRINP1O60477 761 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 C1SP09871 688 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 OR4Q2P0C623 313 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 GABRG2P18507 467 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 GPC1P35052 558 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 KIR2DL1P43626 348 aaPredicted RBP8.55□□□□□ -1.04
LINC01961-201ENST00000449954 NLRP12P59046 1061 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 POU4F2Q12837 409 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 NFATC3Q12968 1075 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 MCM6Q14566 821 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 HLA-BQ31612 363 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 USP37Q86T82 979 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 MON1AQ86VX9 555 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 TTC9BQ8N6N2 239 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 ATAD1Q8NBU5 361 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 TBCKQ8TEA7 893 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 DNASE2BQ8WZ79 361 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 YTHDC1Q96MU7 727 aaKnown RBP8.55□□□□□ -1.04
LINC01961-201ENST00000449954 CCDC43Q96MW1 224 aaKnown RBP8.55□□□□□ -1.04
LINC01961-201ENST00000449954 SEPT5Q99719 369 aaPredicted RBP8.55□□□□□ -1.04
LINC01961-201ENST00000449954 LPIN3Q9BQK8 851 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 CCDC94Q9BW85 323 aaPredicted RBP8.55□□□□□ -1.04
LINC01961-201ENST00000449954 POLR3FQ9H1D9 316 aaPredicted RBP8.55□□□□□ -1.04
LINC01961-201ENST00000449954 CPNE5Q9HCH3 593 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 RAB6BQ9NRW1 208 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 FTSJ1Q9UET6 329 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 VAV3Q9UKW4 847 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 BTBD3Q9Y2F9 522 aa8.55□□□□□ -1.04
LINC01961-201ENST00000449954 TRIP11Q15643 1979 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 ZBTB43O43298 467 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 PCDHGA12O60330 932 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 ADAM23O75077 832 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 SOAT2O75908 522 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 LARGE1O95461 756 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 TDP2O95551 362 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 APODP05090 189 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 KCNE1P15382 129 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 TCF3P15923 654 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 ATF6P18850 670 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 HNRNPUQ00839 825 aaKnown RBP eCLIP8.54□□□□□ -1.04
LINC01961-201ENST00000449954 PTH1RQ03431 593 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 TARDBPQ13148 414 aaKnown RBP eCLIP8.54□□□□□ -1.04
LINC01961-201ENST00000449954 CLN3Q13286 438 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 EPHA7Q15375 998 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 ALKAL1Q6UXT8 129 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 TMEM150AQ86TG1 271 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 ZCCHC9Q8N567 271 aaKnown RBP8.54□□□□□ -1.04
LINC01961-201ENST00000449954 RUFY2Q8WXA3 655 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 FAM20AQ96MK3 541 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 PNKPQ96T60 521 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 SLKQ9H2G2 1235 aaPredicted RBP8.54□□□□□ -1.04
LINC01961-201ENST00000449954 CYP8B1Q9UNU6 501 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 DOLKQ9UPQ8 538 aa8.54□□□□□ -1.04
LINC01961-201ENST00000449954 OBSL1O75147 1896 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 A0A0A0MRY4 1105 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 GOLGA8AA7E2F4 631 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 GOLGA8BA8MQT2 603 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.53□□□□□ -1.04
LINC01961-201ENST00000449954 RFPL3O75679 317 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 KAT7O95251 611 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 F11P03951 625 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 CKMP06732 381 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 USP17L7P0C7H9 530 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 HOXB2P14652 356 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 NMT1P30419 496 aaKnown RBP8.53□□□□□ -1.04
LINC01961-201ENST00000449954 GRIA2P42262 883 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 TNFRSF4P43489 277 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 CCT8P50990 548 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 RCAN1P53805 252 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 SMARCB1Q12824 385 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 SF3A1Q15459 793 aaKnown RBP8.53□□□□□ -1.04
LINC01961-201ENST00000449954 MGAT5BQ3V5L5 792 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 EEF1DP3Q658K8 133 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 TXNDC8Q6A555 127 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 ARMCX5Q6P1M9 558 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 XKR5Q6UX68 686 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 CACTIN-AS1Q8N1I8 211 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 PHTF2Q8N3S3 785 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 KIAA1958Q8N8K9 716 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 ZNF578Q96N58 590 aaPredicted RBP8.53□□□□□ -1.04
LINC01961-201ENST00000449954 MTMR9Q96QG7 549 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 DPH1Q9BZG8 443 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 LNPKQ9C0E8 428 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 CCDC113Q9H0I3 377 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 GPRC5CQ9NQ84 441 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 ANKEF1Q9NU02 776 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 GMIPQ9P107 970 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms