RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 GAD1Q99259 594 aa11.78□□□□□ -0.52
PTCH2-203ENST00000447098 DHX15O43143 795 aaKnown RBP11.77□□□□□ -0.52
PTCH2-203ENST00000447098 OPHN1O60890 802 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 HMBSP08397 361 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 NFICP08651 508 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 EIF4BP23588 611 aaKnown RBP11.77□□□□□ -0.52
PTCH2-203ENST00000447098 CHKAP35790 457 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 SKIV2L2P42285 1042 aaKnown RBP11.77□□□□□ -0.52
PTCH2-203ENST00000447098 PTGIRP43119 386 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 NR1H3Q13133 447 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 TAF1BQ53T94 588 aaPredicted RBP11.77□□□□□ -0.52
PTCH2-203ENST00000447098 CFAP157Q5JU67 520 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 UBAP2Q5T6F2 1119 aaKnown RBP11.77□□□□□ -0.52
PTCH2-203ENST00000447098 C11orf63Q6NUN7 778 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 ANKRD23Q86SG2 305 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 TTC8Q8TAM2 541 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 RBM15Q96T37 977 aaKnown RBP eCLIP11.77□□□□□ -0.52
PTCH2-203ENST00000447098 CDT1Q9H211 546 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 VCX3BQ9H321 246 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 VCX3AQ9NNX9 186 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 METTL5Q9NRN9 209 aaKnown RBP11.77□□□□□ -0.52
PTCH2-203ENST00000447098 ASNSD1Q9NWL6 643 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 NKX1-2Q9UD57 310 aaPredicted RBP11.77□□□□□ -0.52
PTCH2-203ENST00000447098 UBQLN1Q9UMX0 589 aaKnown RBP11.77□□□□□ -0.52
PTCH2-203ENST00000447098 ATP11BQ9Y2G3 1177 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 TCRBV7S2A1N4TA0A589 114 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 E7ENQ6 273 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 ZC3H11AO75152 810 aaKnown RBP eCLIP11.77□□□□□ -0.52
PTCH2-203ENST00000447098 GRIK1P39086 918 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 TAF6P49848 677 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 ROR2Q01974 943 aaKnown RBP11.77□□□□□ -0.52
PTCH2-203ENST00000447098 LAMB3Q13751 1172 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 DUSP28Q4G0W2 176 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 BRSK2Q8IWQ3 736 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 FAM13CQ8NE31 585 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 IP6K2Q9UHH9 426 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 COG5Q9UP83 839 aa11.77□□□□□ -0.52
PTCH2-203ENST00000447098 MYH4Q9Y623 1939 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 SMPD1P17405 629 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 ZPBP2Q6X784 338 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 PALB2Q86YC2 1186 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 DNAAF3Q8N9W5 541 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 PCSK9Q8NBP7 692 aaKnown RBP11.77□□□□□ -0.53
PTCH2-203ENST00000447098 ATL2Q8NHH9 583 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 CD99L2Q8TCZ2 262 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 TXLNGYQ9BZA5 131 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 ABI2Q9NYB9 513 aaPredicted RBP11.77□□□□□ -0.53
PTCH2-203ENST00000447098 I3L4J1 428 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 WFS1O76024 890 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 CD4P01730 458 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 JAM2P57087 298 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 VSTM1Q6UX27 236 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 NLRP9Q7RTR0 991 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 NOP9Q86U38 636 aaKnown RBP11.77□□□□□ -0.53
PTCH2-203ENST00000447098 LPPQ93052 612 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 MBOAT7Q96N66 472 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 CYTH2Q99418 400 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 APBA2Q99767 749 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 TRIM55Q9BYV6 548 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 EPB41L4BQ9H329 900 aa11.77□□□□□ -0.53
PTCH2-203ENST00000447098 TREHO43280 583 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 LINGO3P0C6S8 592 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 UBTFL6P0CB48 400 aaPredicted RBP11.76□□□□□ -0.53
PTCH2-203ENST00000447098 ZBTB48P10074 688 aaPredicted RBP11.76□□□□□ -0.53
PTCH2-203ENST00000447098 ACO1P21399 889 aaKnown RBP11.76□□□□□ -0.53
PTCH2-203ENST00000447098 DYNC1I2Q13409 638 aaKnown RBP11.76□□□□□ -0.53
PTCH2-203ENST00000447098 KYAT1Q16773 422 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 DCAF6Q58WW2 860 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 WASHC2DQ5SRD0 308 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 CDCA2Q69YH5 1023 aaPredicted RBP11.76□□□□□ -0.53
PTCH2-203ENST00000447098 WDR49Q8IV35 697 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 PWWP2AQ96N64 755 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 HMX1Q9NP08 348 aaPredicted RBP11.76□□□□□ -0.53
PTCH2-203ENST00000447098 ALG13Q9NP73 1137 aaKnown RBP11.76□□□□□ -0.53
PTCH2-203ENST00000447098 SIX2Q9NPC8 291 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 SLCO1B3Q9NPD5 702 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 NINJ2Q9NZG7 142 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 CCDC22O60826 627 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 TJP3O95049 919 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 ARF4P18085 180 aaPredicted RBP11.76□□□□□ -0.53
PTCH2-203ENST00000447098 SH3D19Q5HYK7 790 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 TMEM63BQ5T3F8 832 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 SNX30Q5VWJ9 437 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 MTDHQ86UE4 582 aaKnown RBP11.76□□□□□ -0.53
PTCH2-203ENST00000447098 APLFQ8IW19 511 aaPredicted RBP11.76□□□□□ -0.53
PTCH2-203ENST00000447098 SHCBP1Q8NEM2 672 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 TMEM106CQ9BVX2 250 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 COL4A1P02462 1669 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 TXNDC9O14530 226 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 ZWINTO95229 277 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 FESP07332 822 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 ALADP13716 330 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 PTPN4P29074 926 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 MAGEA4P43358 317 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 HTRA3P83110 453 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 PARP6Q2NL67 630 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 DCAF4L1Q3SXM0 396 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 GALNTL6Q49A17 601 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 CCDC14Q49A88 953 aa11.76□□□□□ -0.53
PTCH2-203ENST00000447098 PPP1R2P3Q6NXS1 205 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms