RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ZFP42Q96MM3 310 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 HNRNPABQ99729 332 aaKnown RBP16.43■□□□□ 0.22
SNX13-204ENST00000444712 RNF19AQ9NV58 838 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 ANAPC5Q9UJX4 755 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 PADI3Q9ULW8 664 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 CCDC130P13994 396 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 LMO2P25791 158 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 IVDP26440 423 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 PTPN9P43378 593 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 ZNF844Q08AG5 666 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 TFDP2Q14188 446 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 RHBDF2Q6PJF5 856 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 ARFGAP2Q8N6H7 521 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 ALLCQ8N6M5 410 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 GAD1Q99259 594 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 TSEN34Q9BSV6 310 aaKnown RBP16.43■□□□□ 0.22
SNX13-204ENST00000444712 PCSK1NQ9UHG2 260 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 DNPEPQ9ULA0 475 aa16.43■□□□□ 0.22
SNX13-204ENST00000444712 GABRDO14764 452 aa16.42■□□□□ 0.22
SNX13-204ENST00000444712 PAPSS1O43252 624 aaPredicted RBP16.42■□□□□ 0.22
SNX13-204ENST00000444712 KLRC2P26717 231 aa16.42■□□□□ 0.22
SNX13-204ENST00000444712 ITGA8P53708 1063 aa16.42■□□□□ 0.22
SNX13-204ENST00000444712 ARHGEF6Q15052 776 aa16.42■□□□□ 0.22
SNX13-204ENST00000444712 OASLQ15646 514 aaKnown RBP16.42■□□□□ 0.22
SNX13-204ENST00000444712 EFHC1Q5JVL4 640 aa16.42■□□□□ 0.22
SNX13-204ENST00000444712 RAET1EQ8TD07 263 aa16.42■□□□□ 0.22
SNX13-204ENST00000444712 SLC2A14Q8TDB8 520 aa16.42■□□□□ 0.22
SNX13-204ENST00000444712 MAK16Q9BXY0 300 aaKnown RBP16.42■□□□□ 0.22
SNX13-204ENST00000444712 GRIN2DO15399 1336 aa16.42■□□□□ 0.22
SNX13-204ENST00000444712 ARL5CA6NH57 179 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 ZNF487B1APH4 448 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 APOC4-APOC2K7ER74 178 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 TULP2O00295 520 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 PIK3R2O00459 728 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 CST8O60676 142 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 ENDOD1O94919 500 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 APOC2P02655 101 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 ACLYP53396 1101 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 SKOR1P84550 965 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 DSC3Q14574 896 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 CCDC14Q49A88 953 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 KCNT1Q5JUK3 1230 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 AGMOQ6ZNB7 445 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 RFX6Q8HWS3 928 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 GSTCDQ8NEC7 633 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 SLC35B2Q8TB61 432 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 HSPH1Q92598 858 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 ACSF2Q96CM8 615 aaPredicted RBP16.41■□□□□ 0.22
SNX13-204ENST00000444712 SENP8Q96LD8 212 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 GLT1D1Q96MS3 346 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 DUSP16Q9BY84 665 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 AGO3Q9H9G7 860 aaKnown RBP16.41■□□□□ 0.22
SNX13-204ENST00000444712 PCDH9Q9HC56 1237 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 CREBZFQ9NS37 354 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 A0A0U1RQF3 1178 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 ARHGEF37A1IGU5 675 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 MDM4O15151 490 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 GHRP10912 638 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 PTPN1P18031 435 aaKnown RBP16.41■□□□□ 0.22
SNX13-204ENST00000444712 CD52P31358 61 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 PLCB3Q01970 1234 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 ADCY2Q08462 1091 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 EMC10Q5UCC4 262 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 IZUMO3Q5VZ72 239 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 DSTYKQ6XUX3 929 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 OSTM1Q86WC4 334 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 SCUBE3Q8IX30 993 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 FAM172AQ8WUF8 416 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 UROC1Q96N76 676 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 CALN1Q9BXU9 219 aa16.41■□□□□ 0.22
SNX13-204ENST00000444712 TSC2P49815 1807 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 NPR3P17342 541 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 CAPN2P17655 700 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 CDH6P55285 790 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 GRIK3Q13003 919 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 KRT81Q14533 505 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 LPIN1Q14693 890 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 TRIP13Q15645 432 aaPredicted RBP16.4■□□□□ 0.22
SNX13-204ENST00000444712 CDO1Q16878 200 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 C15orf59Q2T9L4 293 aaPredicted RBP16.4■□□□□ 0.22
SNX13-204ENST00000444712 KRT71Q3SY84 523 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 ZNF618Q5T7W0 954 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 WSCD1Q658N2 575 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 TRNP1Q6NT89 227 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 KDM7AQ6ZMT4 941 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 LEKR1Q6ZMV7 388 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 PCGF5Q86SE9 256 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 CD99L2Q8TCZ2 262 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 KCTD13Q8WZ19 329 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 PIWIL1Q96J94 861 aaKnown RBP16.4■□□□□ 0.22
SNX13-204ENST00000444712 CFAP57Q96MR6 1250 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 TMEM109Q9BVC6 243 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 NGRNQ9NPE2 291 aaKnown RBP16.4■□□□□ 0.22
SNX13-204ENST00000444712 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNX13-204ENST00000444712 DDX43Q9NXZ2 648 aaKnown RBP16.4■□□□□ 0.22
SNX13-204ENST00000444712 DNALI1O14645 258 aaPredicted RBP16.4■□□□□ 0.22
SNX13-204ENST00000444712 MCF2LO15068 1137 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 GRAP2O75791 330 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 NR1D1P20393 614 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 SCNN1GP51170 649 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms