RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 HOXA13P31271 388 aaPredicted RBP5.22□□□□□ -1.57
HERC1-201ENST00000443617 PTP4A2Q12974 167 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.22□□□□□ -1.57
HERC1-201ENST00000443617 PHF12Q96QT6 1004 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 PCDH9Q9HC56 1237 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 TXNDC16Q9P2K2 825 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 DNAJC16Q9Y2G8 782 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 LIASO43766 372 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 STIP1P31948 543 aaKnown RBP5.22□□□□□ -1.57
HERC1-201ENST00000443617 ACADVLP49748 655 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 ADGRE1Q14246 886 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 COG2Q14746 738 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 SIX1Q15475 284 aaPredicted RBP5.22□□□□□ -1.57
HERC1-201ENST00000443617 CTC1Q2NKJ3 1217 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 CXorf38Q8TB03 319 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 C11orf70Q9BRQ4 267 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 TMEM206Q9H813 350 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 KCNK13Q9HB14 408 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 XAB2Q9HCS7 855 aaKnown RBP5.22□□□□□ -1.57
HERC1-201ENST00000443617 FETUBQ9UGM5 382 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 DNPEPQ9ULA0 475 aa5.22□□□□□ -1.57
HERC1-201ENST00000443617 CFAP99D6REC4 459 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 S100BP04271 92 aaPredicted RBP5.21□□□□□ -1.57
HERC1-201ENST00000443617 ITGAVP06756 1048 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 MROH9Q5TGP6 573 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 BORAQ6PGQ7 559 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 RFX6Q8HWS3 928 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 MARVELD2Q8N4S9 558 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 FAF2Q96CS3 445 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 BCAP31P51572 246 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 PRAMEP78395 509 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 FASTKD3Q14CZ7 662 aaKnown RBP5.21□□□□□ -1.57
HERC1-201ENST00000443617 ZNF410Q86VK4 478 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 FBXO36Q8NEA4 188 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 DKK3Q9UBP4 350 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 CROTQ9UKG9 612 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 BASP1P80723 227 aaKnown RBP5.21□□□□□ -1.57
HERC1-201ENST00000443617 RELAQ04206 551 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 ZNF543Q08ER8 600 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 DMP1Q13316 513 aaPredicted RBP5.21□□□□□ -1.57
HERC1-201ENST00000443617 NR1D2Q14995 579 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 FAM102BQ5T8I3 360 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 TREML1Q86YW5 311 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 GPATCH1Q9BRR8 931 aaKnown RBP5.21□□□□□ -1.57
HERC1-201ENST00000443617 ZDHHC7Q9NXF8 308 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 IGSF9Q9P2J2 1179 aa5.21□□□□□ -1.57
HERC1-201ENST00000443617 CCDC162PA2VCL2 907 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 OXSR1O95747 527 aaPredicted RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 IREB2P48200 963 aaKnown RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 BNC2Q6ZN30 1099 aaPredicted RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 CLVS1Q8IUQ0 354 aaPredicted RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 ANKRD36BP1Q96IX9 119 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 WNK4Q96J92 1243 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 HALP42357 657 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 TRPC4APQ8TEL6 797 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 SERAC1Q96JX3 654 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 PKD2L1Q9P0L9 805 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 ADAMTS6Q9UKP5 1117 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 ASTN1O14525 1302 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 NFAT5O94916 1531 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 ITM2AO43736 263 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 STT3AP46977 705 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 ENTPD1P49961 510 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 N4BP2L1Q5TBK1 243 aaPredicted RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 ACTRT2Q8TDY3 377 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 RTKNQ9BST9 563 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 PCDHB2Q9Y5E7 798 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 NLRP11P59045 1033 aaKnown RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 HYIQ5T013 277 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 ENOSF1Q7L5Y1 443 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 RIOX1Q9H6W3 641 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 KCND2Q9NZV8 630 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 APOEP02649 317 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 EIF2S1P05198 315 aaKnown RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 COX4I1P13073 169 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 MSLNQ13421 630 aaPredicted RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 LRRC38Q5VT99 294 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 ADGRD1Q6QNK2 874 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 ARCQ7LC44 396 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.21□□□□□ -1.58
HERC1-201ENST00000443617 FRMD8P1Q9BZ68 369 aaPredicted RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 FBP2O00757 339 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 RHBDF2Q6PJF5 856 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 MFSD7Q6UXD7 560 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 TTC13Q8NBP0 860 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 COPS7BQ9H9Q2 264 aaPredicted RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 KIF20BQ96Q89 1820 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 RNF103-CHMP3A0A140T963 221 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 KLF11O14901 512 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 KLHL41O60662 606 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 KRT10P13645 584 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 ACAT1P24752 427 aaKnown RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 CCNIQ14094 377 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 EFHC2Q5JST6 749 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 DCDC5Q6ZRR9 648 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 CENPSQ8N2Z9 138 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 SLITRK1Q96PX8 696 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 WRNIP1Q96S55 665 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 TRIM15Q9C019 465 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 ARMC7Q9H6L4 198 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms