RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 DENND1BQ6P3S1 775 aa16.94■□□□□ 0.3
USP39-205ENST00000442708 OTOP3Q7RTS5 596 aa16.94■□□□□ 0.3
USP39-205ENST00000442708 TDRD5Q8NAT2 981 aaKnown RBP16.94■□□□□ 0.3
USP39-205ENST00000442708 XPO4Q9C0E2 1151 aaKnown RBP16.94■□□□□ 0.3
USP39-205ENST00000442708 ATXN3LQ9H3M9 355 aa16.94■□□□□ 0.3
USP39-205ENST00000442708 EPS15L1Q9UBC2 864 aa16.94■□□□□ 0.3
USP39-205ENST00000442708 NR2E1Q9Y466 385 aa16.94■□□□□ 0.3
USP39-205ENST00000442708 NUP210Q8TEM1 1887 aaPredicted RBP16.93■□□□□ 0.3
USP39-205ENST00000442708 M0QYV0 167 aa16.93■□□□□ 0.3
USP39-205ENST00000442708 THAP12O43422 761 aa16.93■□□□□ 0.3
USP39-205ENST00000442708 GFPT2O94808 682 aa16.93■□□□□ 0.3
USP39-205ENST00000442708 COL9A1P20849 921 aa16.93■□□□□ 0.3
USP39-205ENST00000442708 BCAT1P54687 386 aa16.93■□□□□ 0.3
USP39-205ENST00000442708 BST2Q10589 180 aaKnown RBP16.93■□□□□ 0.3
USP39-205ENST00000442708 TAF10Q12962 218 aa16.93■□□□□ 0.3
USP39-205ENST00000442708 PIGZQ86VD9 579 aa16.93■□□□□ 0.3
USP39-205ENST00000442708 ZDHHC14Q8IZN3 488 aa16.93■□□□□ 0.3
USP39-205ENST00000442708 SECISBP2LQ93073 1101 aaKnown RBP16.93■□□□□ 0.3
USP39-205ENST00000442708 UHRF1Q96T88 793 aaPredicted RBP16.93■□□□□ 0.3
USP39-205ENST00000442708 PNPLA8Q9NP80 782 aa16.93■□□□□ 0.3
USP39-205ENST00000442708 LIMD1Q9UGP4 676 aa16.93■□□□□ 0.3
USP39-205ENST00000442708 FAM92AA1XBS5 289 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 XPO1O14980 1071 aaKnown RBP16.92■□□□□ 0.3
USP39-205ENST00000442708 FGF19O95750 216 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 YWHAQP27348 245 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 CDC25CP30307 473 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 SOX5P35711 763 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 KIF11P52732 1056 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 RAB41Q5JT25 222 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 GPR158Q5T848 1215 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 TXNDC8Q6A555 127 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 SMYD5Q6GMV2 418 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 PMF1Q6P1K2 205 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 SLC35F5Q8WV83 523 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 RSAD2Q8WXG1 361 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 DDX1Q92499 740 aaKnown RBP16.92■□□□□ 0.3
USP39-205ENST00000442708 BAP1Q92560 729 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 ACSF2Q96CM8 615 aaPredicted RBP16.92■□□□□ 0.3
USP39-205ENST00000442708 SLC46A2Q9BY10 475 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 UBXN6Q9BZV1 441 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 TTYH3Q9C0H2 523 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 UXTQ9UBK9 157 aaPredicted RBP16.92■□□□□ 0.3
USP39-205ENST00000442708 HESX1Q9UBX0 185 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 RAPGEFL1Q9UHV5 662 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 CYTH4Q9UIA0 394 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 NCANO14594 1321 aa16.92■□□□□ 0.3
USP39-205ENST00000442708 C2orf78A6NCI8 922 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 RTN3O95197 1032 aaPredicted RBP16.91■□□□□ 0.3
USP39-205ENST00000442708 CYP11B1P15538 503 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 FCARP24071 287 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 GPD2P43304 727 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 PLA2G4AP47712 749 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 RGS7P49802 495 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 PTK2Q05397 1052 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 STILQ15468 1287 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 FAM78AQ5JUQ0 283 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 PARM1Q6UWI2 310 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 NOP9Q86U38 636 aaKnown RBP16.91■□□□□ 0.3
USP39-205ENST00000442708 GJD3Q8N144 294 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 WDTC1Q8N5D0 677 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 KHSRPQ92945 711 aaKnown RBP eCLIP16.91■□□□□ 0.3
USP39-205ENST00000442708 FBXO32Q969P5 355 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 SPAG5Q96R06 1193 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 SLC22A12Q96S37 553 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 RPP25Q9BUL9 199 aaKnown RBP16.91■□□□□ 0.3
USP39-205ENST00000442708 GDE1Q9NZC3 331 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 GMIPQ9P107 970 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 CHORDC1Q9UHD1 332 aaPredicted RBP16.91■□□□□ 0.3
USP39-205ENST00000442708 DAAM1Q9Y4D1 1078 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 USP3Q9Y6I4 520 aa16.91■□□□□ 0.3
USP39-205ENST00000442708 TRIOO75962 3097 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 HELZP42694 1942 aaKnown RBP16.9■□□□□ 0.3
USP39-205ENST00000442708 MUC3AQ02505 3323 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 TTC28Q96AY4 2481 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 ZNF840PA6NDX5 716 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 ANHXE9PGG2 379 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 MED7O43513 233 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 ASGR2P07307 311 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 SETSIPP0DME0 302 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 HTR4Q13639 388 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 BHLHA9Q7RTU4 235 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 RNF135Q8IUD6 432 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 PASD1Q8IV76 773 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 PLCD3Q8N3E9 789 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 MAB21L3Q8N8X9 362 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 ZSCAN18Q8TBC5 510 aaPredicted RBP16.9■□□□□ 0.3
USP39-205ENST00000442708 EPS8L1Q8TE68 723 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 SLC20A1Q8WUM9 679 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 NDRG1Q92597 394 aaKnown RBP16.9■□□□□ 0.3
USP39-205ENST00000442708 FGF14Q92915 247 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 ASB16Q96NS5 453 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 CYP2S1Q96SQ9 504 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 SMG9Q9H0W8 520 aaKnown RBP16.9■□□□□ 0.3
USP39-205ENST00000442708 TASP1Q9H6P5 420 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 COMMD8Q9NX08 183 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 OSER1Q9NX31 292 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 NOCTQ9UK39 431 aaKnown RBP16.9■□□□□ 0.3
USP39-205ENST00000442708 PCDHGC3Q9UN70 934 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 SCML2Q9UQR0 700 aa16.9■□□□□ 0.3
USP39-205ENST00000442708 ZFP37Q9Y6Q3 630 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms