RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 ZNRF3Q9ULT6 936 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 SORBS2O94875 1100 aaKnown RBP14.74□□□□□ -0.05
MCF2L-218ENST00000442625 CST3P01034 146 aaPredicted RBP14.74□□□□□ -0.05
MCF2L-218ENST00000442625 RARBP10826 455 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 ELK3P41970 407 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 CLDN10P78369 228 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
MCF2L-218ENST00000442625 AP1B1Q10567 949 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 PRKD1Q15139 912 aaPredicted RBP14.74□□□□□ -0.05
MCF2L-218ENST00000442625 TFDP3Q5H9I0 405 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 DNAJC24Q6P3W2 148 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 ATP11CQ8NB49 1132 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 MCPH1Q8NEM0 835 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 GATA6Q92908 595 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 ATG4CQ96DT6 458 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 ACAP3Q96P50 834 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 FOXP3Q9BZS1 431 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 SLC13A1Q9BZW2 595 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 IRF2BPLQ9H1B7 796 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 ACSS3Q9H6R3 686 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 STX18Q9P2W9 335 aaKnown RBP14.74□□□□□ -0.05
MCF2L-218ENST00000442625 PPARGC1AQ9UBK2 798 aaKnown RBP14.74□□□□□ -0.05
MCF2L-218ENST00000442625 PCSK1NQ9UHG2 260 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 SHOC2Q9UQ13 582 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 DCAF8L1A6NGE4 600 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 MAP3K6O95382 1288 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 KCNA2P16389 499 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 IL1R2P27930 398 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 HIRAP54198 1017 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-218ENST00000442625 IRX4P78413 519 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 NCOA4Q13772 614 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 CMPK2Q5EBM0 449 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 TRIM72Q6ZMU5 477 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 MFN1Q8IWA4 741 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 LARGE2Q8N3Y3 721 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 PPFIBP2Q8ND30 876 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 ZNF184Q99676 751 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-218ENST00000442625 RPAP3Q9H6T3 665 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-218ENST00000442625 C17orf75Q9HAS0 396 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 PCDH9Q9HC56 1237 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 RNF146Q9NTX7 359 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-218ENST00000442625 TTLL13PA6NNM8 815 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 TBC1D12O60347 775 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 TPP2P29144 1249 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-218ENST00000442625 ALDH18A1P54886 795 aaKnown RBP14.73□□□□□ -0.05
MCF2L-218ENST00000442625 YWHAGP61981 247 aaKnown RBP eCLIP14.73□□□□□ -0.05
MCF2L-218ENST00000442625 EMC2Q15006 297 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 TMCO4Q5TGY1 634 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 NPNTQ6UXI9 565 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 SCARA5Q6ZMJ2 495 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 RIPOR1Q6ZS17 1223 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 VSIG10LQ86VR7 867 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 EMC1Q8N766 993 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 NAT8LQ8N9F0 302 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 CFAP61Q8NHU2 1237 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 VCPIP1Q96JH7 1222 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 PANX3Q96QZ0 392 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 GMLQ99445 158 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 VPS11Q9H270 941 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 OCEL1Q9H607 264 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 JPH1Q9HDC5 661 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-218ENST00000442625 PPM1HQ9ULR3 514 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 SNCAIPQ9Y6H5 919 aa14.73□□□□□ -0.05
MCF2L-218ENST00000442625 KBTBD13C9JR72 458 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 ZSCAN9O15535 394 aaPredicted RBP14.72□□□□□ -0.05
MCF2L-218ENST00000442625 UGT1A9O60656 530 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 PSAPP07602 524 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 TNFSF9P41273 254 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 ETV4P43268 484 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 ACTR2P61160 394 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 PSMC1P62191 440 aaKnown RBP14.72□□□□□ -0.05
MCF2L-218ENST00000442625 ORC1Q13415 861 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 BMPR2Q13873 1038 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 SMAD1Q15797 465 aaKnown RBP14.72□□□□□ -0.05
MCF2L-218ENST00000442625 ZCCHC23Q6ZST2 131 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 TTC30AQ86WT1 665 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 ARID3BQ8IVW6 561 aaPredicted RBP14.72□□□□□ -0.05
MCF2L-218ENST00000442625 CTAGE3PQ8IX95 158 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 PPIL6Q8IXY8 311 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 USP6NLQ92738 828 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 CFAP36Q96G28 342 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 SHCBP1LQ9BZQ2 653 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 C20orf27Q9GZN8 174 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 UGT1A7Q9HAW7 530 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 UGT1A10Q9HAW8 530 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 UGT1A8Q9HAW9 530 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 RABL2BQ9UNT1 228 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 TCRBV9S1A1TA0A576 114 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 APBA3O96018 575 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 ITGAVP06756 1048 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 WEE2P0C1S8 567 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 CCND2P30279 289 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 GHRHRQ02643 423 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 UBAP2LQ14157 1087 aaKnown RBP14.72□□□□□ -0.05
MCF2L-218ENST00000442625 FAXCQ5TGI0 409 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 ZBTB33Q86T24 672 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 KIAA0319LQ8IZA0 1049 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 EFCAB3Q8N7B9 438 aa14.72□□□□□ -0.05
MCF2L-218ENST00000442625 SLC35B2Q8TB61 432 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms