RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 DERAQ9Y315 318 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 OAS3Q9Y6K5 1087 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 SYNDIG1LA6NDD5 238 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 STX16-NPEPL1H3BU86 382 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 STX16O14662 325 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 DHHO43323 396 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 TAF5LO75529 589 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 MTA2O94776 668 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 PRSS23O95084 383 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 LMNAP02545 664 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 PLA2G1BP04054 148 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 CNPP09543 421 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 CSF1P09603 554 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 CHRM3P20309 590 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 CCR9P51686 369 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 CLNS1AP54105 237 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 NPEPPSP55786 919 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 KRT17Q04695 432 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 GALNT2Q10471 571 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 ATP1A4Q13733 1029 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 IQCB1Q15051 598 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 RPS6KA2Q15349 733 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 SMAD1Q15797 465 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 CCDC129Q6ZRS4 1044 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 B4GALNT4Q76KP1 1039 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 TTC30AQ86WT1 665 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 REXO1L1PQ8IX06 675 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 CHCHD4Q8N4Q1 142 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 NGEFQ8N5V2 710 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 ZMIZ2Q8NF64 920 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 TBC1D22AQ8WUA7 517 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 RNF125Q96EQ8 232 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 AJUBAQ96IF1 538 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 FAM227BQ96M60 508 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 GPR20Q99678 358 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 SLC46A2Q9BY10 475 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 PRDM13Q9H4Q3 707 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 NOD2Q9HC29 1040 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 CD248Q9HCU0 757 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 IL23AQ9NPF7 189 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 NSMCE4AQ9NXX6 385 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 TMOD4Q9NZQ9 345 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 FAM30AQ9NZY2 134 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 TBX20Q9UMR3 447 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 SMC3Q9UQE7 1217 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 TBKBP1A7MCY6 615 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 B5MCH6 92 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 IPO8O15397 1037 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 ITGB1P05556 798 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 CYP21A2P08686 494 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 SERPINA4P29622 427 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 CSF2RBP32927 897 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 GALNSP34059 522 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 NPTX2P47972 431 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 KCNC1P48547 511 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 LILRA4P59901 499 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 GALNTL6Q49A17 601 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 MED25Q71SY5 747 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 R3HCC1LQ7Z5L2 792 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 EPC1Q9H2F5 836 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 GHITMQ9H3K2 345 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 ETAA1Q9NY74 926 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 RAI14Q9P0K7 980 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 TBC1D29Q9UFV1 150 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 CNTN6Q9UQ52 1028 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 CYP46A1Q9Y6A2 500 aa4.55□□□□□ -1.68
CDC42BPA-207ENST00000441725 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 PNMA6EA0A0J9YXQ4 647 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 SRGAP2O75044 1071 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 RPP40O75818 363 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 GLI1P08151 1106 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 STAT1P42224 750 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 MAGEA10P43363 369 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 CLK1P49759 484 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 ZNF134P52741 427 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 PDCLQ13371 301 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 USP10Q14694 798 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 BMT2Q1RMZ1 405 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 PTCHD3Q3KNS1 767 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 MGAT5BQ3V5L5 792 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 TMEFF1Q8IYR6 380 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 FITM2Q8N6M3 262 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 RNF169Q8NCN4 708 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 NSUN7Q8NE18 718 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 BPIFB1Q8TDL5 484 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 CPT1BQ92523 772 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 SGPP1Q9BX95 441 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 AP1M1Q9BXS5 423 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 HAUS2Q9NVX0 235 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 NKIRAS2Q9NYR9 191 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 HSF4Q9ULV5 492 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 MRPS17Q9Y2R5 130 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 UBE2QL1A1L167 161 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 VWA3AA6NCI4 1184 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 FAM90A20PA6NIJ5 464 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 VGLL3A8MV65 326 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 KIF28PB7ZC32 967 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 ZSCAN9O15535 394 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms