RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 DLG3Q92796 817 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ACE2Q9BYF1 805 aaPredicted RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 FOXP3Q9BZS1 431 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ARHGAP39Q9C0H5 1083 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 GLT8D2Q9H1C3 349 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 WNT8AQ9H1J5 351 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 HPS4Q9NQG7 708 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 TBCCD1Q9NVR7 557 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CPSF1Q10570 1443 aaKnown RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 TMEM2Q9UHN6 1383 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 WTIPA6NIX2 430 aaPredicted RBP6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 H7BY64 318 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 TECPR2O15040 1411 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 NKRFO15226 690 aaKnown RBP eCLIP6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 TIAF1O95411 115 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 HEXBP07686 556 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SRGAP2BP0DMP2 458 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 HLA-DPA1P20036 260 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ITGA8P53708 1063 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 EXOSC9Q06265 439 aaKnown RBP6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 RUNX1T1Q06455 604 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CUL2Q13617 745 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ZNF674Q2M3X9 581 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 TBC1D25Q3MII6 688 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CDC42BPGQ6DT37 1551 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PHYKPLQ8IUZ5 450 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 REXO1L1PQ8IX06 675 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 NLGN4XQ8N0W4 816 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 C2CD4AQ8NCU7 369 aaPredicted RBP6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 RNF139Q8WU17 664 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 HSPH1Q92598 858 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 RGMAQ96B86 450 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 THOC1Q96FV9 657 aaKnown RBP6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 Q96M66 194 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 COLEC11Q9BWP8 271 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 POFUT1Q9H488 388 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 UBR1Q8IWV7 1749 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PRSS38A1L453 326 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 C7orf72A4D263 438 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PHGDHO43175 533 aaKnown RBP6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 URI1O94763 535 aaPredicted RBP6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 WISP1O95388 367 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SLU7O95391 586 aaKnown RBP6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PRLRP16471 622 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 RAB6AP20340 208 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CHMLP26374 656 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PRKAR2BP31323 418 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 FNTBP49356 437 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 VPS41P49754 854 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CDR1P51861 262 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 MAP2K6P52564 334 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 LGALS4P56470 323 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 DMPKQ09013 629 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CUL4AQ13619 759 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 IQCB1Q15051 598 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PLCL1Q15111 1095 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 THEMIS2Q5TEJ8 643 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 AADACL4Q5VUY2 407 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ACAD11Q709F0 780 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SPATA24Q86W54 205 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CCDC83Q8IWF9 413 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 RNF152Q8N8N0 203 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ZNF566Q969W8 418 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 TCTN2Q96GX1 697 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 MAML3Q96JK9 1138 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CCDC106Q9BWC9 280 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 NACAP1Q9BZK3 213 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 BRD8Q9H0E9 1235 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ZCWPW1Q9H0M4 648 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 NT5C3AQ9H0P0 336 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 WNT5BQ9H1J7 359 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ATP13A2Q9NQ11 1180 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 KRT84Q9NSB2 600 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ZNF215Q9UL58 517 aaPredicted RBP6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CCPG1Q9ULG6 757 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ATP23Q9Y6H3 246 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CPS1P31327 1500 aa6.22□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 F5H0A9 414 aaPredicted RBP6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 EBAG9O00559 213 aa6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PLA2G6O60733 806 aa6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CBX7O95931 251 aa6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SCG2P13521 617 aa6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PRKAR1BP31321 381 aa6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 HNRNPH1P31943 449 aaKnown RBP6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 NR2C2P49116 596 aa6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 AFF3P51826 1226 aaKnown RBP6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MRPL12P52815 198 aaKnown RBP6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 RNASE9P60153 205 aaKnown RBP6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CUL4BQ13620 913 aa6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 FGL2Q14314 439 aa6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MXD4Q14582 209 aaPredicted RBP6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MVPQ14764 893 aaKnown RBP6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ALG11Q2TAA5 492 aa6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 IL27RAQ6UWB1 636 aa6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 RTN4RL1Q86UN2 441 aaPredicted RBP6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 RAB11FIP4Q86YS3 637 aa6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 FAM114A1Q8IWE2 563 aa6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 DENND6BQ8NEG7 585 aa6.21□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ZMIZ2Q8NF64 920 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms