RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 C2orf42Q9NWW7 574 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 ZNF638Q14966 1978 aaKnown RBP17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 HELZP42694 1942 aaKnown RBP17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 ATG13O75143 517 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 AKAP3O75969 853 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 ZNF202O95125 648 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 RTN3O95197 1032 aaPredicted RBP17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 PIK3CAP42336 1068 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 ASPAP45381 313 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 VAMP7P51809 220 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 ZXDBP98169 803 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 DMWDQ09019 674 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 FBXO43Q4G163 708 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 PAQR9Q6ZVX9 377 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 ERMP1Q7Z2K6 904 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 UNC93AQ86WB7 457 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 PDZD8Q8NEN9 1154 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 CCDC34Q96HJ3 373 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 GMEB2Q9UKD1 530 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 RAB23Q9ULC3 237 aa17.29■□□□□ 0.36
SNRPD3-204ENST00000439775 CHURC1-FNTBB4DL54 471 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 LEFTY2O00292 366 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 NFATC1O95644 943 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 EGFP01133 1207 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 HLA-DRAP01903 254 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 RPL13P26373 211 aaKnown RBP17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 YWHAQP27348 245 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 FNTBP49356 437 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 NR1H3Q13133 447 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 ZCWPW2Q504Y3 356 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 LAIR1Q6GTX8 287 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 PKN3Q6P5Z2 889 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 FUKQ8N0W3 1084 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 TTC16Q8NEE8 873 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 ELMO3Q96BJ8 720 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 IMPG2Q9BZV3 1241 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 RNF38Q9H0F5 515 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 GDPD2Q9HCC8 539 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 IL37Q9NZH6 218 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 MAPK8IP1Q9UQF2 711 aa17.28■□□□□ 0.36
SNRPD3-204ENST00000439775 DNAH14Q0VDD8 3507 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 CCDC163A0A0D9SF12 145 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 FAM92AA1XBS5 289 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 TNFRSF10BO14763 440 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 RNF40O75150 1001 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 TUBP50607 506 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 GALK1P51570 392 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 NDST1P52848 882 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 SLC5A3P53794 718 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 MCCD1P59942 119 aaPredicted RBP17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 INCA1Q0VD86 236 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 EDRF1Q3B7T1 1238 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 SNX30Q5VWJ9 437 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 NAIF1Q69YI7 327 aaPredicted RBP17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 ACOT1Q86TX2 421 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 WDR5BQ86VZ2 330 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 DDX42Q86XP3 938 aaKnown RBP eCLIP17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 FAM186BQ8IYM0 893 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 CRYBG2Q8N1P7 616 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 CD101Q93033 1021 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 RMDN1Q96DB5 314 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 KCNK16Q96T55 309 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 MED10Q9BTT4 135 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 FBRSL1Q9HCM7 1045 aaKnown RBP17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 KRT82Q9NSB4 513 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 COMMD8Q9NX08 183 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 HMGXB4Q9UGU5 601 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 CPQQ9Y646 472 aa17.27■□□□□ 0.36
SNRPD3-204ENST00000439775 HRO43593 1189 aa17.26■□□□□ 0.35
SNRPD3-204ENST00000439775 ABL1P00519 1130 aa17.26■□□□□ 0.35
SNRPD3-204ENST00000439775 KRT13P13646 458 aa17.26■□□□□ 0.35
SNRPD3-204ENST00000439775 TRIM21P19474 475 aaKnown RBP17.26■□□□□ 0.35
SNRPD3-204ENST00000439775 PSMC2P35998 433 aaKnown RBP17.26■□□□□ 0.35
SNRPD3-204ENST00000439775 IFRD2Q12894 506 aaPredicted RBP17.26■□□□□ 0.35
SNRPD3-204ENST00000439775 SIM2Q14190 667 aaPredicted RBP17.26■□□□□ 0.35
SNRPD3-204ENST00000439775 SPOPLQ6IQ16 392 aa17.26■□□□□ 0.35
SNRPD3-204ENST00000439775 PRR23BQ6ZRT6 265 aa17.26■□□□□ 0.35
SNRPD3-204ENST00000439775 FBXO32Q969P5 355 aa17.26■□□□□ 0.35
SNRPD3-204ENST00000439775 LINC00597Q9H2U6 94 aa17.26■□□□□ 0.35
SNRPD3-204ENST00000439775 CSNK1G1Q9HCP0 422 aa17.26■□□□□ 0.35
SNRPD3-204ENST00000439775 CACNA1AO00555 2505 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 SLC9A3R1O14745 358 aaPredicted RBP17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 LRP3O75074 770 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 AP1G2O75843 785 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 RETP07949 1114 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 ZDHHC11BP0C7U3 371 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 TRIM49P0CI25 452 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 TRIM49CP0CI26 452 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 CCDC130P13994 396 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 TGM1P22735 817 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 GTF2H1P32780 548 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 GCLMP48507 274 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 PPP3CAQ08209 521 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 ADAM9Q13443 819 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 BECN1Q14457 450 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 HEATR6Q6AI08 1181 aaKnown RBP17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 FMR1NBQ8N0W7 255 aaPredicted RBP17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 CCDC26Q8TAB7 109 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 SCAMP5Q8TAC9 235 aa17.25■□□□□ 0.35
SNRPD3-204ENST00000439775 SLC2A14Q8TDB8 520 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms