RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 EHD2Q9NZN4 543 aa8.44□□□□□ -1.06
LINC00578-201ENST00000439009 TRPM5Q9NZQ8 1165 aa8.44□□□□□ -1.06
LINC00578-201ENST00000439009 MAGEC2Q9UBF1 373 aaPredicted RBP8.44□□□□□ -1.06
LINC00578-201ENST00000439009 SEL1LQ9UBV2 794 aa8.44□□□□□ -1.06
LINC00578-201ENST00000439009 CDH9Q9ULB4 789 aa8.44□□□□□ -1.06
LINC00578-201ENST00000439009 SNX9Q9Y5X1 595 aa8.44□□□□□ -1.06
LINC00578-201ENST00000439009 HELZ2Q9BYK8 2649 aaKnown RBP8.44□□□□□ -1.06
LINC00578-201ENST00000439009 ATG2BQ96BY7 2078 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.43□□□□□ -1.06
LINC00578-201ENST00000439009 AP5Z1O43299 807 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 HCRTO43612 131 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 ATP2C2O75185 946 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 GJB3O75712 270 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 LDHAP00338 332 aaKnown RBP8.43□□□□□ -1.06
LINC00578-201ENST00000439009 APODP05090 189 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 KRT18P05783 430 aaKnown RBP8.43□□□□□ -1.06
LINC00578-201ENST00000439009 GARTP22102 1010 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 WARSP23381 471 aaKnown RBP8.43□□□□□ -1.06
LINC00578-201ENST00000439009 ITPKAP23677 461 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 LMO2P25791 158 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 TIE1P35590 1138 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 MAPK8P45983 427 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 FAM193AP78312 1265 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 GFPT1Q06210 699 aaPredicted RBP8.43□□□□□ -1.06
LINC00578-201ENST00000439009 KCNA1Q09470 495 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 DHX8Q14562 1220 aaKnown RBP8.43□□□□□ -1.06
LINC00578-201ENST00000439009 L1TD1Q5T7N2 865 aaKnown RBP8.43□□□□□ -1.06
LINC00578-201ENST00000439009 KIAA1211LQ6NV74 962 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 SLC36A4Q6YBV0 504 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 DENND5BQ6ZUT9 1274 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 PROSER1Q86XN7 944 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 ETFBKMTQ8IXQ9 262 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 KRI1Q8N9T8 703 aaKnown RBP8.43□□□□□ -1.06
LINC00578-201ENST00000439009 ZSWIM2Q8NEG5 633 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 KBTBD7Q8WVZ9 684 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 LARP4BQ92615 738 aaKnown RBP8.43□□□□□ -1.06
LINC00578-201ENST00000439009 OTUB2Q96DC9 234 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 C8orf48Q96LL4 319 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 ACCSQ96QU6 501 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 FAM213AQ9BRX8 229 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 ZHX3Q9H4I2 956 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 CD248Q9HCU0 757 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 TBC1D14Q9P2M4 693 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 EXOC7Q9UPT5 735 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 STARD13Q9Y3M8 1113 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 KIF3AQ9Y496 699 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 GPSM3Q9Y4H4 160 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 GON4LQ3T8J9 2241 aa8.43□□□□□ -1.06
LINC00578-201ENST00000439009 E2F8A0AVK6 867 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 ARHGAP33O14559 1287 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 HOXC11O43248 304 aaPredicted RBP8.42□□□□□ -1.06
LINC00578-201ENST00000439009 OPHN1O60890 802 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 BMP15O95972 392 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 ADH1CP00326 375 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 ADH5P11766 374 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 GABRG2P18507 467 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 BDNFP23560 247 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 GRIK1P39086 918 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 GRIN1Q05586 938 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 MYO1EQ12965 1108 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 RESTQ13127 1097 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 PREPLQ4J6C6 727 aaPredicted RBP8.42□□□□□ -1.06
LINC00578-201ENST00000439009 SOWAHCQ53LP3 525 aaPredicted RBP8.42□□□□□ -1.06
LINC00578-201ENST00000439009 SNX30Q5VWJ9 437 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 MCTP1Q6DN14 999 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 ARMCX6Q7L4S7 300 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 TRMT11Q7Z4G4 463 aaKnown RBP8.42□□□□□ -1.06
LINC00578-201ENST00000439009 C12orf40Q86WS4 652 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 SFR1Q86XK3 245 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 DDX42Q86XP3 938 aaKnown RBP eCLIP8.42□□□□□ -1.06
LINC00578-201ENST00000439009 HDDC3Q8N4P3 179 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 CHCHD4Q8N4Q1 142 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 TTC16Q8NEE8 873 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 MYCBPAPQ8TBZ2 947 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 HMGB4Q8WW32 186 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 ADAMTS14Q8WXS8 1223 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 OVCA2Q8WZ82 227 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 MYLPFQ96A32 169 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 DNAJC19Q96DA6 116 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 ZFRQ96KR1 1074 aaKnown RBP8.42□□□□□ -1.06
LINC00578-201ENST00000439009 SYT15Q9BQS2 421 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 ARHGEF4Q9NR80 690 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 OLFML3Q9NRN5 406 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 INTS13Q9NVM9 706 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 RBAKQ9NYW8 714 aaPredicted RBP8.42□□□□□ -1.06
LINC00578-201ENST00000439009 BCCIPQ9P287 314 aaKnown RBP eCLIP8.42□□□□□ -1.06
LINC00578-201ENST00000439009 HCN2Q9UL51 889 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 PCDHB13Q9Y5F0 798 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 CPQQ9Y646 472 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 DENND4CQ5VZ89 1909 aa8.42□□□□□ -1.06
LINC00578-201ENST00000439009 SMG1Q96Q15 3661 aaKnown RBP8.42□□□□□ -1.06
LINC00578-201ENST00000439009 NUP205Q92621 2012 aa8.41□□□□□ -1.06
LINC00578-201ENST00000439009 IGHV1OR15-9A0A0B4J2B8 117 aa8.41□□□□□ -1.06
LINC00578-201ENST00000439009 A0A1W2PQD8 194 aa8.41□□□□□ -1.06
LINC00578-201ENST00000439009 A0A1W2PQF6 199 aa8.41□□□□□ -1.06
LINC00578-201ENST00000439009 TCRBV21S2A2A0A5A6 115 aa8.41□□□□□ -1.06
LINC00578-201ENST00000439009 FRMD3A2A2Y4 597 aa8.41□□□□□ -1.06
LINC00578-201ENST00000439009 TRIM66O15016 1216 aa8.41□□□□□ -1.06
LINC00578-201ENST00000439009 ZNF217O75362 1048 aa8.41□□□□□ -1.06
LINC00578-201ENST00000439009 TACC1O75410 805 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms