RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 OSBPL6Q9BZF3 934 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 THAP9Q9H5L6 903 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 PNPLA8Q9NP80 782 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 THG1LQ9NWX6 298 aaKnown RBP18.86■□□□□ 0.61
NCSTN-208ENST00000438008 GREB1Q4ZG55 1949 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 NUP210Q8TEM1 1887 aaPredicted RBP18.86■□□□□ 0.61
NCSTN-208ENST00000438008 SHISA7A6NL88 538 aa18.85■□□□□ 0.61
NCSTN-208ENST00000438008 OLFM2O95897 454 aa18.85■□□□□ 0.61
NCSTN-208ENST00000438008 MBD3O95983 291 aa18.85■□□□□ 0.61
NCSTN-208ENST00000438008 TCF3P15923 654 aa18.85■□□□□ 0.61
NCSTN-208ENST00000438008 HDCP19113 662 aa18.85■□□□□ 0.61
NCSTN-208ENST00000438008 SNX30Q5VWJ9 437 aa18.85■□□□□ 0.61
NCSTN-208ENST00000438008 TPRG1Q6ZUI0 275 aa18.85■□□□□ 0.61
NCSTN-208ENST00000438008 ARL14EPQ8N8R7 260 aaPredicted RBP18.85■□□□□ 0.61
NCSTN-208ENST00000438008 PJA1Q8NG27 643 aa18.85■□□□□ 0.61
NCSTN-208ENST00000438008 FBXO32Q969P5 355 aa18.85■□□□□ 0.61
NCSTN-208ENST00000438008 NELL2Q99435 816 aa18.85■□□□□ 0.61
NCSTN-208ENST00000438008 DUSP16Q9BY84 665 aa18.85■□□□□ 0.61
NCSTN-208ENST00000438008 FBXO44Q9H4M3 255 aa18.85■□□□□ 0.61
NCSTN-208ENST00000438008 ARHGAP26Q9UNA1 814 aa18.85■□□□□ 0.61
NCSTN-208ENST00000438008 SIT1Q9Y3P8 196 aa18.85■□□□□ 0.61
NCSTN-208ENST00000438008 DENND4CQ5VZ89 1909 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 KMT2EQ8IZD2 1858 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 HHLA1C9JL84 531 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 MAN2B1O00754 1011 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 OAS1P00973 400 aaKnown RBP18.84■□□□□ 0.61
NCSTN-208ENST00000438008 CKMP06732 381 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 ZDHHC11BP0C7U3 371 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 SLC7A9P82251 487 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 GCNT1Q02742 428 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 IFRD2Q12894 506 aaPredicted RBP18.84■□□□□ 0.61
NCSTN-208ENST00000438008 TPD52L1Q16890 204 aaPredicted RBP18.84■□□□□ 0.61
NCSTN-208ENST00000438008 ZNF852Q6ZMS4 543 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 CSGALNACT1Q8TDX6 532 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 MSANTD3Q96H12 275 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 FAM83CQ9BQN1 747 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 UBXN6Q9BZV1 441 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 FOXQ1Q9C009 403 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 KIAA1257Q9ULG3 409 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 OBSL1O75147 1896 aa18.84■□□□□ 0.61
NCSTN-208ENST00000438008 GALR2O43603 387 aaPredicted RBP18.83■□□□□ 0.6
NCSTN-208ENST00000438008 ACO1P21399 889 aaKnown RBP18.83■□□□□ 0.6
NCSTN-208ENST00000438008 ZNF77Q15935 545 aa18.83■□□□□ 0.6
NCSTN-208ENST00000438008 C1orf228Q6PIY5 440 aa18.83■□□□□ 0.6
NCSTN-208ENST00000438008 FAM114A1Q8IWE2 563 aa18.83■□□□□ 0.6
NCSTN-208ENST00000438008 CCDC105Q8IYK2 499 aa18.83■□□□□ 0.6
NCSTN-208ENST00000438008 PPM1KQ8N3J5 372 aa18.83■□□□□ 0.6
NCSTN-208ENST00000438008 KIAA1958Q8N8K9 716 aa18.83■□□□□ 0.6
NCSTN-208ENST00000438008 PRSS33Q8NF86 280 aa18.83■□□□□ 0.6
NCSTN-208ENST00000438008 RIN3Q8TB24 985 aa18.83■□□□□ 0.6
NCSTN-208ENST00000438008 ZFYVE19Q96K21 471 aa18.83■□□□□ 0.6
NCSTN-208ENST00000438008 INTS2Q9H0H0 1204 aaKnown RBP18.83■□□□□ 0.6
NCSTN-208ENST00000438008 C8orf33Q9H7E9 229 aaPredicted RBP18.83■□□□□ 0.6
NCSTN-208ENST00000438008 LTB4R2Q9NPC1 389 aa18.83■□□□□ 0.6
NCSTN-208ENST00000438008 GKN1Q9NS71 199 aa18.83■□□□□ 0.6
NCSTN-208ENST00000438008 DLGAP2Q9P1A6 1054 aa18.83■□□□□ 0.6
NCSTN-208ENST00000438008 CHORDC1Q9UHD1 332 aaPredicted RBP18.83■□□□□ 0.6
NCSTN-208ENST00000438008 MRPS17Q9Y2R5 130 aaKnown RBP18.83■□□□□ 0.6
NCSTN-208ENST00000438008 PIAS3Q9Y6X2 628 aa18.83■□□□□ 0.6
NCSTN-208ENST00000438008 TUBP50607 506 aa18.82■□□□□ 0.6
NCSTN-208ENST00000438008 USP4Q13107 963 aa18.82■□□□□ 0.6
NCSTN-208ENST00000438008 CREBRFQ8IUR6 639 aa18.82■□□□□ 0.6
NCSTN-208ENST00000438008 ANKRD52Q8NB46 1076 aa18.82■□□□□ 0.6
NCSTN-208ENST00000438008 KAT5Q92993 513 aa18.82■□□□□ 0.6
NCSTN-208ENST00000438008 JAKMIP2Q96AA8 810 aa18.82■□□□□ 0.6
NCSTN-208ENST00000438008 RNF38Q9H0F5 515 aa18.82■□□□□ 0.6
NCSTN-208ENST00000438008 SCML2Q9UQR0 700 aa18.82■□□□□ 0.6
NCSTN-208ENST00000438008 COL4A2P08572 1712 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 GTPBP10A4D1E9 387 aaKnown RBP18.81■□□□□ 0.6
NCSTN-208ENST00000438008 FAM170BA6NMN3 283 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 ABL1P00519 1130 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 PAEPP09466 180 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 VDRP11473 427 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 CD72P21854 359 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 MTIF2P46199 727 aaKnown RBP18.81■□□□□ 0.6
NCSTN-208ENST00000438008 KIF11P52732 1056 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 PTPN5P54829 565 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 TCF15Q12870 199 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 MTF1Q14872 753 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 UBXN2BQ14CS0 331 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 PDGFRLQ15198 375 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 SGO2Q562F6 1265 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 HECTD3Q5T447 861 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 CC2D1AQ6P1N0 951 aaPredicted RBP18.81■□□□□ 0.6
NCSTN-208ENST00000438008 TMEM270Q6UE05 265 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 RRAGAQ7L523 313 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 GPRIN1Q7Z2K8 1008 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 ARHGEF19Q8IW93 802 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 ZNF687Q8N1G0 1237 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 DTWD2Q8NBA8 298 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 SH3RF2Q8TEC5 729 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 GTSE1Q9NYZ3 720 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 GMIPQ9P107 970 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 MTF2Q9Y483 593 aaPredicted RBP18.81■□□□□ 0.6
NCSTN-208ENST00000438008 PCDHB4Q9Y5E5 795 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 USP3Q9Y6I4 520 aa18.81■□□□□ 0.6
NCSTN-208ENST00000438008 NCAM2O15394 837 aa18.8■□□□□ 0.6
NCSTN-208ENST00000438008 DCNP07585 359 aaKnown RBP18.8■□□□□ 0.6
NCSTN-208ENST00000438008 TARSP26639 723 aaKnown RBP18.8■□□□□ 0.6
NCSTN-208ENST00000438008 MAGEA9P43362 315 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms