RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 CCSER1Q9C0I3 900 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 RANBP17Q9H2T7 1088 aaKnown RBP12.63□□□□□ -0.39
UBE3B-203ENST00000434735 APRTP07741 180 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 KCNA5P22460 613 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 DENND5BQ6ZUT9 1274 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 PATL1Q86TB9 770 aaKnown RBP12.63□□□□□ -0.39
UBE3B-203ENST00000434735 SYT2Q8N9I0 419 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-203ENST00000434735 ELMO2Q96JJ3 720 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 TMEM117Q9H0C3 514 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 GPSM3Q9Y4H4 160 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 P4HA2O15460 535 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 ZNF445P59923 1031 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 DDX39BQ13838 428 aaKnown RBP12.62□□□□□ -0.39
UBE3B-203ENST00000434735 SLC24A5Q71RS6 500 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 FAM131BQ86XD5 332 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 EPB41L5Q9HCM4 733 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 TLL2Q9Y6L7 1015 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 ACKR2O00590 384 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 IGSF6O95976 241 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 CDC25CP30307 473 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 CCR1P32246 355 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 LRRC74AQ0VAA2 488 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 CRY2Q49AN0 593 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 CCDC60Q8IWA6 550 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-203ENST00000434735 BCAS4Q8TDM0 211 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-203ENST00000434735 L3MBTL1Q9Y468 752 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 MIF4GDA9UHW6 222 aaKnown RBP12.62□□□□□ -0.39
UBE3B-203ENST00000434735 FOXN1O15353 648 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 KRT38O76015 456 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 ARIH2O95376 493 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 ETF1P62495 437 aaKnown RBP12.62□□□□□ -0.39
UBE3B-203ENST00000434735 EXOSC10Q01780 885 aaKnown RBP12.62□□□□□ -0.39
UBE3B-203ENST00000434735 MAP3K10Q02779 954 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 ABHD8Q96I13 439 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 CBWD1Q9BRT8 395 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 RNF14Q9UBS8 474 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 TREHO43280 583 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 PYGBP11216 843 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 HTR1BP28222 390 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 BLVRAP53004 296 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 CDH8P55286 799 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 C6orf118Q5T5N4 469 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 SHDQ96IW2 340 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 FAM129AQ9BZQ8 928 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 MED4Q9NPJ6 270 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 PKD2L2Q9NZM6 624 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 ZFATQ9P243 1243 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 STX18Q9P2W9 335 aaKnown RBP12.62□□□□□ -0.39
UBE3B-203ENST00000434735 PADI3Q9ULW8 664 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 INSL6Q9Y581 213 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 ARHGAP23Q9P227 1491 aa12.62□□□□□ -0.39
UBE3B-203ENST00000434735 LGALS16A8MUM7 142 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 TRDMT1O14717 391 aaKnown RBP12.61□□□□□ -0.39
UBE3B-203ENST00000434735 MSH3P20585 1137 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 SLC8A1P32418 973 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 ADIGQ0VDE8 80 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 GRSF1Q12849 480 aaKnown RBP eCLIP12.61□□□□□ -0.39
UBE3B-203ENST00000434735 MTFR1Q15390 333 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 TEAD4Q15561 434 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 WSCD1Q658N2 575 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 TRAPPC11Q7Z392 1133 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 LPCAT1Q8NF37 534 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 KAT2BQ92831 832 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 ZFYVE1Q9HBF4 777 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 SUPT3HB4E1H0 165 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 RBAK-RBAKDNI3L0D1 243 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 RHOBTB1O94844 696 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 CENPAP49450 140 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 SETMARQ53H47 684 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-203ENST00000434735 ILDR2Q71H61 639 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 DDX42Q86XP3 938 aaKnown RBP eCLIP12.61□□□□□ -0.39
UBE3B-203ENST00000434735 TDRD5Q8NAT2 981 aaKnown RBP12.61□□□□□ -0.39
UBE3B-203ENST00000434735 ADAM32Q8TC27 787 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 AGPAT3Q9NRZ7 376 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 MARCH2Q9P0N8 246 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 CDY1Q9Y6F8 540 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 VWDEQ8N2E2 1590 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 GTPBP10A4D1E9 387 aaKnown RBP12.61□□□□□ -0.39
UBE3B-203ENST00000434735 NEDD8-MDP1E9PL57 170 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 FZD9O00144 591 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 RTN2O75298 545 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 MAP3K6O95382 1288 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 HPGDP15428 266 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 GUCY2CP25092 1073 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 KRT20P35900 424 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 FXR2P51116 673 aaKnown RBP eCLIP12.61□□□□□ -0.39
UBE3B-203ENST00000434735 SNRPFP62306 86 aaKnown RBP12.61□□□□□ -0.39
UBE3B-203ENST00000434735 BST2Q10589 180 aaKnown RBP12.61□□□□□ -0.39
UBE3B-203ENST00000434735 E4F1Q66K89 784 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-203ENST00000434735 SIX5Q8N196 739 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 C1orf54Q8WWF1 131 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 NT5MQ9NPB1 228 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.61□□□□□ -0.39
UBE3B-203ENST00000434735 FAM105AQ9NUU6 356 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 ZNF521Q96K83 1311 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 NDUFA10O95299 355 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 TRIM16O95361 564 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 ATP1A3P13637 1013 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 BRAFP15056 766 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms