RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 CD19P15391 556 aa20.01■□□□□ 0.79
RPUSD3-207ENST00000433555 DDX6P26196 483 aaKnown RBP eCLIP20.01■□□□□ 0.79
RPUSD3-207ENST00000433555 KRT31Q15323 416 aa20.01■□□□□ 0.79
RPUSD3-207ENST00000433555 EXOC3L4Q17RC7 722 aa20.01■□□□□ 0.79
RPUSD3-207ENST00000433555 AOPEPQ8N6M6 819 aa20.01■□□□□ 0.79
RPUSD3-207ENST00000433555 USP13Q92995 863 aaPredicted RBP20.01■□□□□ 0.79
RPUSD3-207ENST00000433555 FBXO32Q969P5 355 aa20.01■□□□□ 0.79
RPUSD3-207ENST00000433555 GMIPQ9P107 970 aa20.01■□□□□ 0.79
RPUSD3-207ENST00000433555 SYCE3A1L190 88 aa20■□□□□ 0.79
RPUSD3-207ENST00000433555 FAM92AA1XBS5 289 aa20■□□□□ 0.79
RPUSD3-207ENST00000433555 ZNF840PA6NDX5 716 aa20■□□□□ 0.79
RPUSD3-207ENST00000433555 TULP2O00295 520 aa20■□□□□ 0.79
RPUSD3-207ENST00000433555 O00370 1275 aa20■□□□□ 0.79
RPUSD3-207ENST00000433555 RTN3O95197 1032 aaPredicted RBP20■□□□□ 0.79
RPUSD3-207ENST00000433555 TRIM21P19474 475 aaKnown RBP20■□□□□ 0.79
RPUSD3-207ENST00000433555 BRD2P25440 801 aaKnown RBP20■□□□□ 0.79
RPUSD3-207ENST00000433555 YWHAQP27348 245 aa20■□□□□ 0.79
RPUSD3-207ENST00000433555 WEE1P30291 646 aa20■□□□□ 0.79
RPUSD3-207ENST00000433555 KCNMA1Q12791 1236 aa20■□□□□ 0.79
RPUSD3-207ENST00000433555 CWF19L1Q69YN2 538 aaKnown RBP20■□□□□ 0.79
RPUSD3-207ENST00000433555 SIX5Q8N196 739 aa20■□□□□ 0.79
RPUSD3-207ENST00000433555 CYP2S1Q96SQ9 504 aa20■□□□□ 0.79
RPUSD3-207ENST00000433555 DUSP16Q9BY84 665 aa20■□□□□ 0.79
RPUSD3-207ENST00000433555 UBE2TQ9NPD8 197 aaPredicted RBP20■□□□□ 0.79
RPUSD3-207ENST00000433555 APEX2Q9UBZ4 518 aa20■□□□□ 0.79
RPUSD3-207ENST00000433555 TSPAN16Q9UKR8 245 aa20■□□□□ 0.79
RPUSD3-207ENST00000433555 BECN2A8MW95 431 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 ARNTLO00327 626 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 CYP26A1O43174 497 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 OAS1P00973 400 aaKnown RBP19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 ZNF18P17022 549 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 PSMC3P17980 439 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 GDI1P31150 447 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 SGO2Q562F6 1265 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 MFSD6LQ8IWD5 586 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 ARL14EPQ8N8R7 260 aaPredicted RBP19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 DEPDC1BQ8WUY9 529 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 ZFYVE19Q96K21 471 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 ACP6Q9NPH0 428 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 ARHGEF3Q9NR81 526 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 TRPM5Q9NZQ8 1165 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 FBXL21Q9UKT6 434 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 CNTN6Q9UQ52 1028 aa19.99■□□□□ 0.79
RPUSD3-207ENST00000433555 TRAV19A0A0A6YYK7 116 aa19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 OLFM2O95897 454 aa19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 PAEPP09466 180 aa19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 PNMA6AP0CW24 399 aaPredicted RBP19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 VDRP11473 427 aa19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 VCPP55072 806 aaKnown RBP19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 FCHO2Q0JRZ9 810 aa19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 USP4Q13107 963 aa19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 APTXQ7Z2E3 356 aaKnown RBP19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 BMP8AQ7Z5Y6 402 aa19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 DHX40Q8IX18 779 aaKnown RBP19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 PBXIP1Q96AQ6 731 aa19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 SLITRK1Q96PX8 696 aa19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 TRMT61BQ9BVS5 477 aaKnown RBP19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 VPS16Q9H269 839 aa19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 EHD2Q9NZN4 543 aa19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 WNT16Q9UBV4 365 aa19.98■□□□□ 0.79
RPUSD3-207ENST00000433555 SHISA7A6NL88 538 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 SOBPA7XYQ1 873 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 CKMP06732 381 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 ZDHHC11BP0C7U3 371 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 KRT5P13647 590 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 AVPR1AP37288 418 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 KLK7P49862 253 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 ZXDBP98169 803 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 PDE4CQ08493 712 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 ARHGAP44Q17R89 818 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 PKDCCQ504Y2 493 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 PIGZQ86VD9 579 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 CELF5Q8N6W0 485 aaKnown RBP19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 ANKRD52Q8NB46 1076 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 UBA3Q8TBC4 463 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 LSM14BQ9BX40 385 aaKnown RBP19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 DNAI2Q9GZS0 605 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 RNF38Q9H0F5 515 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 NMUR1Q9HB89 426 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 PNPLA8Q9NP80 782 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 OSER1Q9NX31 292 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 OBP2AQ9NY56 170 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 ZMYM5Q9UJ78 669 aa19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.97■□□□□ 0.79
RPUSD3-207ENST00000433555 PES1O00541 588 aaKnown RBP19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 ABL1P00519 1130 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 USP17L7P0C7H9 530 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 ATP1A3P13637 1013 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 KIF11P52732 1056 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 COPB1P53618 953 aaKnown RBP19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 BCAT1P54687 386 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 ZNF268Q14587 947 aaPredicted RBP19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 ZNF77Q15935 545 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 PDZD8Q8NEN9 1154 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 BPIFB1Q8TDL5 484 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 OVCA2Q8WZ82 227 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 SHC3Q92529 594 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 E2F7Q96AV8 911 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 BPIFA3Q9BQP9 254 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 CCSER2Q9H7U1 834 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms