RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 NACA2Q9H009 215 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 TASP1Q9H6P5 420 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 KCNK12Q9HB15 430 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 LRRC4Q9HBW1 653 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 ZFP14Q9HCL3 533 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 CSNK1G1Q9HCP0 422 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 PLCB1Q9NQ66 1216 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 IGSF9Q9P2J2 1179 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 TTC28Q96AY4 2481 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 VCANP13611 3396 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 TRAV19A0A0A6YYK7 116 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 LRRC10BA6NIK2 292 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 O00370 1275 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 NRG2O14511 850 aaPredicted RBP16.38■□□□□ 0.21
TREX1-201ENST00000433541 MOSPD3O75425 235 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 F11P03951 625 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 CKMP06732 381 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 SETSIPP0DME0 302 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 DDX6P26196 483 aaKnown RBP eCLIP16.38■□□□□ 0.21
TREX1-201ENST00000433541 FANCCQ00597 558 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 PDE4CQ08493 712 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 PTPN21Q16825 1174 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 FAM78AQ5JUQ0 283 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 TTC30AQ86WT1 665 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 YAF2Q8IY57 180 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 FGF14Q92915 247 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 SMARCD2Q92925 531 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 NXPE3Q969Y0 559 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 ZSWIM3Q96MP5 696 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 TTLL2Q9BWV7 592 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 RTN4Q9NQC3 1192 aaKnown RBP16.38■□□□□ 0.21
TREX1-201ENST00000433541 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.38■□□□□ 0.21
TREX1-201ENST00000433541 SORCS3Q9UPU3 1222 aa16.38■□□□□ 0.21
TREX1-201ENST00000433541 BDP1A6H8Y1 2624 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 FOXN3O00409 490 aaPredicted RBP16.37■□□□□ 0.21
TREX1-201ENST00000433541 XPO1O14980 1071 aaKnown RBP16.37■□□□□ 0.21
TREX1-201ENST00000433541 TEX33O43247 280 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 DCXO43602 365 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 TPM3P06753 285 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 ALADP13716 330 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 KRT9P35527 623 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 PPP3CCP48454 512 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 PDE6CP51160 858 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 ZNF132P52740 706 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 UBASH3AP57075 661 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 BPIFB4P59827 614 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 TDGQ13569 410 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 HTR4Q13639 388 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 CNGA2Q16280 664 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 LCLAT1Q6UWP7 414 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 GPRIN1Q7Z2K8 1008 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 PIGZQ86VD9 579 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 ARID3BQ8IVW6 561 aaPredicted RBP16.37■□□□□ 0.21
TREX1-201ENST00000433541 SIX6OS1Q8N1H7 587 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 SECISBP2LQ93073 1101 aaKnown RBP16.37■□□□□ 0.21
TREX1-201ENST00000433541 ASB16Q96NS5 453 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 ERGIC2Q96RQ1 377 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 STK33Q9BYT3 514 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 GANQ9H2C0 597 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 PNPLA8Q9NP80 782 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 ACP6Q9NPH0 428 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 TLR8Q9NR97 1041 aaKnown RBP16.37■□□□□ 0.21
TREX1-201ENST00000433541 ST7Q9NRC1 585 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 COMMD8Q9NX08 183 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 GMIPQ9P107 970 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 CHORDC1Q9UHD1 332 aaPredicted RBP16.37■□□□□ 0.21
TREX1-201ENST00000433541 ZMYM5Q9UJ78 669 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 CNTN6Q9UQ52 1028 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 SIK3Q9Y2K2 1263 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 CEP83Q9Y592 693 aa16.37■□□□□ 0.21
TREX1-201ENST00000433541 C2orf78A6NCI8 922 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 F8VZ95 297 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 TNFRSF10BO14763 440 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 TADA3O75528 432 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 GFPT2O94808 682 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 LCP1P13796 627 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 VIPR2P41587 438 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 RGS7P49802 495 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 TKTL1P51854 596 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 GRM2Q14416 872 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 TANGO2Q6ICL3 276 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 APTXQ7Z2E3 356 aaKnown RBP16.36■□□□□ 0.21
TREX1-201ENST00000433541 TMEM150AQ86TG1 271 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 CMTM8Q8IZV2 173 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 ZNF606Q8WXB4 792 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 SLC46A2Q9BY10 475 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 SMG9Q9H0W8 520 aaKnown RBP16.36■□□□□ 0.21
TREX1-201ENST00000433541 FBXL21Q9UKT6 434 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 DAAM1Q9Y4D1 1078 aa16.36■□□□□ 0.21
TREX1-201ENST00000433541 A0A1B0GTH6 734 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 PIK3R2O00459 728 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 USP17L7P0C7H9 530 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 HDCP19113 662 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 STAT1P42224 750 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 ZNF445P59923 1031 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 ARID5AQ03989 594 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 ADIGQ0VDE8 80 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 SLC47A2Q86VL8 602 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 MON1AQ86VX9 555 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 PASD1Q8IV76 773 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms