RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 CYP11B1P15538 503 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 CEBPBP17676 345 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 PLA2G4AP47712 749 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 RAB41Q5JT25 222 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 CYP4A22Q5TCH4 519 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 PIGZQ86VD9 579 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 VSTM4Q8IW00 320 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 UBA3Q8TBC4 463 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 SLC35F5Q8WV83 523 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 DDX1Q92499 740 aaKnown RBP15.2■□□□□ 0.02
CSTF3-202ENST00000431742 IQCDQ96DY2 449 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 NUP58Q9BVL2 599 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 COMMD8Q9NX08 183 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 EHD2Q9NZN4 543 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 UXTQ9UBK9 157 aaPredicted RBP15.2■□□□□ 0.02
CSTF3-202ENST00000431742 PRKAG3Q9UGI9 489 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 NOCTQ9UK39 431 aaKnown RBP15.2■□□□□ 0.02
CSTF3-202ENST00000431742 USTQ9Y2C2 406 aa15.2■□□□□ 0.02
CSTF3-202ENST00000431742 MRPS23Q9Y3D9 190 aaKnown RBP15.2■□□□□ 0.02
CSTF3-202ENST00000431742 GYPCP04921 128 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 GABRR2P28476 465 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 CDC25CP30307 473 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 SSTR3P32745 418 aaPredicted RBP15.19■□□□□ 0.02
CSTF3-202ENST00000431742 GPD2P43304 727 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 RPL34P49207 117 aaKnown RBP15.19■□□□□ 0.02
CSTF3-202ENST00000431742 PDE6CP51160 858 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 ZP2Q05996 745 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 TAF12Q16514 161 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 DENND1BQ6P3S1 775 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 GET4Q7L5D6 327 aaPredicted RBP15.19■□□□□ 0.02
CSTF3-202ENST00000431742 NOP9Q86U38 636 aaKnown RBP15.19■□□□□ 0.02
CSTF3-202ENST00000431742 NPAS3Q8IXF0 933 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 SCAMP5Q8TAC9 235 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 KCTD13Q8WZ19 329 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 SECISBP2LQ93073 1101 aaKnown RBP15.19■□□□□ 0.02
CSTF3-202ENST00000431742 MYADMQ96S97 322 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.19■□□□□ 0.02
CSTF3-202ENST00000431742 MAGED2Q9UNF1 606 aaPredicted RBP15.19■□□□□ 0.02
CSTF3-202ENST00000431742 USP3Q9Y6I4 520 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 MYO10Q9HD67 2058 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 BDP1A6H8Y1 2624 aa15.19■□□□□ 0.02
CSTF3-202ENST00000431742 A0A1W2PRU2 124 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 LRRC53A6NM62 1247 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 GABBR2O75899 941 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 YWHAQP27348 245 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 KIF11P52732 1056 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 SLC8A3P57103 927 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 TJAP1Q5JTD0 557 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 E4F1Q66K89 784 aaPredicted RBP15.18■□□□□ 0.02
CSTF3-202ENST00000431742 SPECC1LQ69YQ0 1117 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 OTOP3Q7RTS5 596 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 ZNF677Q86XU0 584 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 FMNL3Q8IVF7 1028 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 ADHFE1Q8IWW8 467 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 ING5Q8WYH8 240 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 OVCA2Q8WZ82 227 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 FGF13Q92913 245 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 LHX5Q9H2C1 402 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 EPS15L1Q9UBC2 864 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 CYTH4Q9UIA0 394 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 CDH7Q9ULB5 785 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 CAPN11Q9UMQ6 739 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 NR2E1Q9Y466 385 aa15.18■□□□□ 0.02
CSTF3-202ENST00000431742 ZFP37Q9Y6Q3 630 aaPredicted RBP15.18■□□□□ 0.02
CSTF3-202ENST00000431742 C19orf67A6NJJ6 358 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 SOBPA7XYQ1 873 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 C2CD4DB7Z1M9 353 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 LOC730098B7Z3J9 87 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 ZDHHC11BP0C7U3 371 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 FERP16591 822 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 GJA1P17302 382 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 CHRNB2P17787 502 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 CDH5P33151 784 aaPredicted RBP15.17■□□□□ 0.02
CSTF3-202ENST00000431742 CDR2Q01850 454 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 TAF10Q12962 218 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 TEAD2Q15562 447 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 STXBP5Q5T5C0 1151 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 PMF1Q6P1K2 205 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 CCDC186Q7Z3E2 898 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 IRF2BP2Q7Z5L9 587 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 GPIHBP1Q8IV16 184 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 WDTC1Q8N5D0 677 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 TDRD5Q8NAT2 981 aaKnown RBP15.17■□□□□ 0.02
CSTF3-202ENST00000431742 OLIG1Q8TAK6 271 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 STK32AQ8WU08 396 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 SLC20A1Q8WUM9 679 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 FBXO32Q969P5 355 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 MRFAP1L1Q96HT8 127 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 GCNAQ96QF7 691 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 SYT11Q9BT88 431 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 TRIM5Q9C035 493 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 FBXO44Q9H4M3 255 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 GDE1Q9NZC3 331 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 AIPL1Q9NZN9 384 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 SCML2Q9UQR0 700 aa15.17■□□□□ 0.02
CSTF3-202ENST00000431742 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.17■□□□□ 0.027e-13■□□□□ 10.1
CSTF3-202ENST00000431742 TTC28Q96AY4 2481 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 LAMP2P13473 410 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 KRT9P35527 623 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 PRKCIP41743 596 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms