RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 KIF11P52732 1056 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 ADIGQ0VDE8 80 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 IFRD2Q12894 506 aaPredicted RBP11.6□□□□□ -0.55
CHD4-202ENST00000430771 ADAM15Q13444 863 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 COL19A1Q14993 1142 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 SDHAF4Q5VUM1 108 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 EP400NLQ6ZTU2 488 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 CCDC170Q8IYT3 715 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 PDZD8Q8NEN9 1154 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 GIPC2Q8TF65 315 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 SLC35F5Q8WV83 523 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 TRIM11Q96F44 468 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 TRMT2BQ96GJ1 504 aaKnown RBP11.6□□□□□ -0.55
CHD4-202ENST00000430771 PPP1R13BQ96KQ4 1090 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 ZNF512Q96ME7 567 aaPredicted RBP11.6□□□□□ -0.55
CHD4-202ENST00000430771 SLITRK1Q96PX8 696 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 KCNK16Q96T55 309 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 BAG1Q99933 345 aaPredicted RBP11.6□□□□□ -0.55
CHD4-202ENST00000430771 PRKD2Q9BZL6 878 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 NHEJ1Q9H9Q4 299 aaPredicted RBP11.6□□□□□ -0.55
CHD4-202ENST00000430771 PIDD1Q9HB75 910 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 LUC7LQ9NQ29 371 aaKnown RBP11.6□□□□□ -0.55
CHD4-202ENST00000430771 ASAH2Q9NR71 780 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 TMEM30AQ9NV96 361 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 STRIP2Q9ULQ0 834 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 ZNF638Q14966 1978 aaKnown RBP11.59□□□□□ -0.55
CHD4-202ENST00000430771 C2orf16Q68DN1 1984 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 OBSL1O75147 1896 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 CDH23Q9H251 3354 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 HHLA1C9JL84 531 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 DDX3XO00571 662 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHD4-202ENST00000430771 LINC01565O15544 149 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 PAPLNO95428 1278 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 CFHP08603 1231 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 RPL34P49207 117 aaKnown RBP11.59□□□□□ -0.55
CHD4-202ENST00000430771 RGS7P49802 495 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 TKTL1P51854 596 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 RBM10P98175 930 aaKnown RBP11.59□□□□□ -0.55
CHD4-202ENST00000430771 ITIH3Q06033 890 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 SKIV2LQ15477 1246 aaKnown RBP11.59□□□□□ -0.55
CHD4-202ENST00000430771 SLC18A3Q16572 532 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 CTC1Q2NKJ3 1217 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 PTPN20Q4JDL3 420 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 RAB41Q5JT25 222 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 RARS2Q5T160 578 aaKnown RBP11.59□□□□□ -0.55
CHD4-202ENST00000430771 CES5AQ6NT32 575 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 PMF1Q6P1K2 205 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 TOGARAM2Q6ZUX3 1019 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 ERICH1Q86X53 443 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 ZDHHC17Q8IUH5 632 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 OVCA2Q8WZ82 227 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 SMG7Q92540 1137 aaKnown RBP11.59□□□□□ -0.55
CHD4-202ENST00000430771 FBXO32Q969P5 355 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 PCDHB18PQ96TA0 734 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 C11orf70Q9BRQ4 267 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 TTLL2Q9BWV7 592 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 SLC4A5Q9BY07 1137 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 CNGB3Q9NQW8 809 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 ADAMTS1Q9UHI8 967 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 MAGED2Q9UNF1 606 aaPredicted RBP11.59□□□□□ -0.55
CHD4-202ENST00000430771 DENND4AQ7Z401 1863 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 NCANO14594 1321 aa11.59□□□□□ -0.55
CHD4-202ENST00000430771 CCDC195A0A1B0GUA6 201 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 E5RJQ4 531 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 TULP2O00295 520 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 TNFRSF10BO14763 440 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 MYBL1P10243 752 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 LCP1P13796 627 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 YWHAQP27348 245 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 CDC25CP30307 473 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 PPP3CCP48454 512 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 GSCP56915 257 aaPredicted RBP11.58□□□□□ -0.56
CHD4-202ENST00000430771 C1QBPQ07021 282 aaKnown RBP11.58□□□□□ -0.56
CHD4-202ENST00000430771 ACAD10Q6JQN1 1059 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 TMC5Q6UXY8 1006 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 MMS22LQ6ZRQ5 1243 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 PDZD4Q76G19 769 aaPredicted RBP11.58□□□□□ -0.56
CHD4-202ENST00000430771 GPRIN1Q7Z2K8 1008 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 DNAJB7Q7Z6W7 309 aaPredicted RBP11.58□□□□□ -0.56
CHD4-202ENST00000430771 PHF13Q86YI8 300 aaPredicted RBP11.58□□□□□ -0.56
CHD4-202ENST00000430771 SCML4Q8N228 414 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 ARHGAP18Q8N392 663 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 OLIG1Q8TAK6 271 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 GPR152Q8TDT2 470 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 CPA5Q8WXQ8 436 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 IRGQQ8WZA9 623 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 GOLGA1Q92805 767 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 C18orf8Q96DM3 657 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 MYRFLQ96LU7 910 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 CPXM1Q96SM3 734 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 CHP1Q99653 195 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 TRIM62Q9BVG3 475 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 ULBP1Q9BZM6 244 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 UBE2ZQ9H832 354 aaPredicted RBP11.58□□□□□ -0.56
CHD4-202ENST00000430771 WDR35Q9P2L0 1181 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 CYTH4Q9UIA0 394 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 NAGPAQ9UK23 515 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 TRANK1O15050 2925 aa11.58□□□□□ -0.56
CHD4-202ENST00000430771 A0A087X0T9 212 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 FAM92AA1XBS5 289 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms