RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ARHGAP8P85298 464 aa18.17■□□□□ 0.5
TRIM39-209ENST00000428728 TAF10Q12962 218 aa18.17■□□□□ 0.5
TRIM39-209ENST00000428728 NR1H3Q13133 447 aa18.17■□□□□ 0.5
TRIM39-209ENST00000428728 NCOA4Q13772 614 aa18.17■□□□□ 0.5
TRIM39-209ENST00000428728 FAM35AQ86V20 835 aa18.17■□□□□ 0.5
TRIM39-209ENST00000428728 EZH1Q92800 747 aaPredicted RBP18.17■□□□□ 0.5
TRIM39-209ENST00000428728 SLITRK1Q96PX8 696 aa18.17■□□□□ 0.5
TRIM39-209ENST00000428728 MED10Q9BTT4 135 aa18.17■□□□□ 0.5
TRIM39-209ENST00000428728 SDCBP2Q9H190 292 aa18.17■□□□□ 0.5
TRIM39-209ENST00000428728 KCTD10Q9H3F6 313 aa18.17■□□□□ 0.5
TRIM39-209ENST00000428728 SEMA4GQ9NTN9 838 aa18.17■□□□□ 0.5
TRIM39-209ENST00000428728 CPQQ9Y646 472 aa18.17■□□□□ 0.5
TRIM39-209ENST00000428728 ATP8B3O60423 1300 aa18.17■□□□□ 0.5
TRIM39-209ENST00000428728 THADAQ6YHU6 1953 aa18.17■□□□□ 0.5
TRIM39-209ENST00000428728 LRP3O75074 770 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 RPP40O75818 363 aaKnown RBP18.16■□□□□ 0.5
TRIM39-209ENST00000428728 VNN1O95497 513 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 NR3C1P04150 777 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 FAM163BP0C2L3 166 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 CCDC192P0DO97 292 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 PFKLP17858 780 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 SDHBP21912 280 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 ATXN1P54253 815 aaKnown RBP18.16■□□□□ 0.5
TRIM39-209ENST00000428728 DLG4P78352 724 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 FBXO43Q4G163 708 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 CEP135Q66GS9 1140 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 FILIP1Q7Z7B0 1213 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 GAB3Q8WWW8 586 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 RNF38Q9H0F5 515 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 VRTNQ9H8Y1 702 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 DMAC2Q9NW81 257 aa18.16■□□□□ 0.5
TRIM39-209ENST00000428728 OAS1P00973 400 aaKnown RBP18.15■□□□□ 0.5
TRIM39-209ENST00000428728 C4BPAP04003 597 aaKnown RBP18.15■□□□□ 0.5
TRIM39-209ENST00000428728 RPN1P04843 607 aaKnown RBP18.15■□□□□ 0.5
TRIM39-209ENST00000428728 PRR29P0C7W0 189 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 MBL2P11226 248 aaPredicted RBP18.15■□□□□ 0.5
TRIM39-209ENST00000428728 CMA1P23946 247 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 YWHAQP27348 245 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 PPP3CCP48454 512 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 AP3M2P53677 418 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 KRT85P78386 507 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 SLC7A9P82251 487 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 ORC1Q13415 861 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 PRR23CQ6ZRP0 262 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 ACOT1Q86TX2 421 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 SLC9A9Q8IVB4 645 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 NUP93Q8N1F7 819 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 FBXO32Q969P5 355 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 TNIP3Q96KP6 325 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 KCNK16Q96T55 309 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.15■□□□□ 0.5
TRIM39-209ENST00000428728 KRT82Q9NSB4 513 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 CFAP97Q9P2B7 532 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 USP25Q9UHP3 1055 aa18.15■□□□□ 0.5
TRIM39-209ENST00000428728 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.14■□□□□ 0.49
TRIM39-209ENST00000428728 DCDC2BA2VCK2 349 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 PDXKO00764 312 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 RTN3O95197 1032 aaPredicted RBP18.14■□□□□ 0.49
TRIM39-209ENST00000428728 OLFM2O95897 454 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 CYP17A1P05093 508 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 OPRD1P41143 372 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 PIK3CAP42336 1068 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 SYKP43405 635 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 SEC13P55735 322 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 CLDN10P78369 228 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 CCDC6Q16204 474 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 CSRP2Q16527 193 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 KBTBD6Q86V97 674 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 ACDQ96AP0 544 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 SMARCD1Q96GM5 515 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 DMAP1Q9NPF5 467 aaPredicted RBP18.14■□□□□ 0.49
TRIM39-209ENST00000428728 HMGXB4Q9UGU5 601 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 HPSEQ9Y251 543 aa18.14■□□□□ 0.49
TRIM39-209ENST00000428728 MYO18AQ92614 2054 aaKnown RBP18.14■□□□□ 0.49
TRIM39-209ENST00000428728 CCDC163A0A0D9SF12 145 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 AXIN1O15169 862 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 AP1G2O75843 785 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 P4HA1P13674 534 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 CCDC130P13994 396 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 NDUFA8P51970 172 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 SLC5A3P53794 718 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 DMC1Q14565 340 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 GAB4Q2WGN9 574 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 ZACNQ401N2 412 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 SPOPLQ6IQ16 392 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 SYT13Q7L8C5 426 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 CACNA2D4Q7Z3S7 1137 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 SCAMP5Q8TAC9 235 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 NETO1Q8TDF5 533 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 RTKNQ9BST9 563 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 ARRDC1-AS1Q9H2J1 176 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 FRMD4BQ9Y2L6 1034 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 ZDHHC9Q9Y397 364 aa18.13■□□□□ 0.49
TRIM39-209ENST00000428728 CALUO43852 315 aaPredicted RBP18.12■□□□□ 0.49
TRIM39-209ENST00000428728 MYL1P05976 194 aa18.12■□□□□ 0.49
TRIM39-209ENST00000428728 PAQR9Q6ZVX9 377 aa18.12■□□□□ 0.49
TRIM39-209ENST00000428728 SV2AQ7L0J3 742 aa18.12■□□□□ 0.49
TRIM39-209ENST00000428728 FUKQ8N0W3 1084 aa18.12■□□□□ 0.49
TRIM39-209ENST00000428728 CAMKK1Q8N5S9 505 aa18.12■□□□□ 0.49
TRIM39-209ENST00000428728 PDZD8Q8NEN9 1154 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms