RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 ADSSL1Q8N142 457 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 CPA6Q8N4T0 437 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 PDZD8Q8NEN9 1154 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 SPATA20Q8TB22 786 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 SLC2A14Q8TDB8 520 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 OSCP1Q8WVF1 389 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 CYP3A43Q9HB55 503 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 APOBEC3GQ9HC16 384 aaKnown RBP19.55■□□□□ 0.72
GPC1-205ENST00000427506 PRMT8Q9NR22 394 aaPredicted RBP19.55■□□□□ 0.72
GPC1-205ENST00000427506 ZSCAN32Q9NX65 697 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 WNT6Q9Y6F9 365 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 PATJQ8NI35 1801 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 OTOL1A6NHN0 477 aaPredicted RBP19.54■□□□□ 0.72
GPC1-205ENST00000427506 ADORA2BP29275 332 aa19.54■□□□□ 0.72
GPC1-205ENST00000427506 CXCL12P48061 93 aa19.54■□□□□ 0.72
GPC1-205ENST00000427506 SLC5A3P53794 718 aa19.54■□□□□ 0.72
GPC1-205ENST00000427506 C12orf29Q8N999 325 aa19.54■□□□□ 0.72
GPC1-205ENST00000427506 FBXL13Q8NEE6 735 aa19.54■□□□□ 0.72
GPC1-205ENST00000427506 ATP2A3Q93084 1043 aa19.54■□□□□ 0.72
GPC1-205ENST00000427506 NT5C1AQ9BXI3 368 aa19.54■□□□□ 0.72
GPC1-205ENST00000427506 CHORDC1Q9UHD1 332 aaPredicted RBP19.54■□□□□ 0.72
GPC1-205ENST00000427506 CIZ1Q9ULV3 898 aaPredicted RBP19.54■□□□□ 0.72
GPC1-205ENST00000427506 PCDHGA2Q9Y5H1 932 aa19.54■□□□□ 0.72
GPC1-205ENST00000427506 PTPRDP23468 1912 aa19.54■□□□□ 0.72
GPC1-205ENST00000427506 ZNF638Q14966 1978 aaKnown RBP19.53■□□□□ 0.72
GPC1-205ENST00000427506 TRIM49BA6NDI0 452 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 LEFTY2O00292 366 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 PSMA7O14818 248 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 SLC16A3O15427 465 aaKnown RBP19.53■□□□□ 0.72
GPC1-205ENST00000427506 PMS1P54277 932 aaKnown RBP19.53■□□□□ 0.72
GPC1-205ENST00000427506 NRLP54845 237 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 MAP3K7CLP57077 242 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 LRRC63Q05C16 580 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 INCA1Q0VD86 236 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 GRSF1Q12849 480 aaKnown RBP eCLIP19.53■□□□□ 0.72
GPC1-205ENST00000427506 NR1H3Q13133 447 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 WDR44Q5JSH3 913 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 MAMSTRQ6ZN01 415 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 Q6ZS52 159 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 ELOA2Q8IYF1 753 aaPredicted RBP19.53■□□□□ 0.72
GPC1-205ENST00000427506 SPEM1Q8N4L4 309 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 SCAMP5Q8TAC9 235 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 OVCA2Q8WZ82 227 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 EXOC4Q96A65 974 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 SMOQ99835 787 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 RNF38Q9H0F5 515 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 ECT2Q9H8V3 914 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 RAB20Q9NX57 234 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 SMPD4Q9NXE4 827 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 CPQQ9Y646 472 aa19.53■□□□□ 0.72
GPC1-205ENST00000427506 ZFHX2Q9C0A1 2572 aaPredicted RBP19.53■□□□□ 0.72
GPC1-205ENST00000427506 GADD45BO75293 160 aaPredicted RBP19.52■□□□□ 0.72
GPC1-205ENST00000427506 FAM200BP0CF97 657 aa19.52■□□□□ 0.72
GPC1-205ENST00000427506 MBL2P11226 248 aaPredicted RBP19.52■□□□□ 0.72
GPC1-205ENST00000427506 TCF3P15923 654 aa19.52■□□□□ 0.72
GPC1-205ENST00000427506 SLC7A9P82251 487 aa19.52■□□□□ 0.72
GPC1-205ENST00000427506 SATB1Q01826 763 aa19.52■□□□□ 0.72
GPC1-205ENST00000427506 GAS6Q14393 721 aa19.52■□□□□ 0.72
GPC1-205ENST00000427506 SYNPOQ8N3V7 929 aa19.52■□□□□ 0.72
GPC1-205ENST00000427506 SEMA4DQ92854 862 aa19.52■□□□□ 0.72
GPC1-205ENST00000427506 CYFIP2Q96F07 1278 aa19.52■□□□□ 0.72
GPC1-205ENST00000427506 TWNKQ96RR1 684 aa19.52■□□□□ 0.72
GPC1-205ENST00000427506 HINFPQ9BQA5 517 aa19.52■□□□□ 0.72
GPC1-205ENST00000427506 FAM126AQ9BYI3 521 aaPredicted RBP19.52■□□□□ 0.72
GPC1-205ENST00000427506 LINC00597Q9H2U6 94 aa19.52■□□□□ 0.72
GPC1-205ENST00000427506 COMMD8Q9NX08 183 aa19.52■□□□□ 0.72
GPC1-205ENST00000427506 MAN1B1Q9UKM7 699 aa19.52■□□□□ 0.72
GPC1-205ENST00000427506 GREB1Q4ZG55 1949 aa19.52■□□□□ 0.72
GPC1-205ENST00000427506 TRDMT1O14717 391 aaKnown RBP19.51■□□□□ 0.71
GPC1-205ENST00000427506 TNFRSF10BO14763 440 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 CILPO75339 1184 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 BEST1O76090 585 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 NFATC1O95644 943 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 OAS1P00973 400 aaKnown RBP19.51■□□□□ 0.71
GPC1-205ENST00000427506 GJA4P35212 333 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 PPP1R2P41236 205 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 MCCD1P59942 119 aaPredicted RBP19.51■□□□□ 0.71
GPC1-205ENST00000427506 CCINQ13939 588 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 EML3Q32P44 896 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 ZNF394Q53GI3 561 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 TMEM196Q5HYL7 178 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 KLHL10Q6JEL2 608 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 ZBTB44Q8NCP5 570 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 ZMIZ2Q8NF64 920 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 JAKMIP2Q96AA8 810 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 DHTKD1Q96HY7 919 aaPredicted RBP19.51■□□□□ 0.71
GPC1-205ENST00000427506 P2RY13Q9BPV8 354 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 FBXO44Q9H4M3 255 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 CSNK1G1Q9HCP0 422 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 ARMCX3Q9UH62 379 aaPredicted RBP19.51■□□□□ 0.71
GPC1-205ENST00000427506 F5P12259 2224 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 CACNA1IQ9P0X4 2223 aa19.51■□□□□ 0.71
GPC1-205ENST00000427506 KIF26AQ9ULI4 1882 aaPredicted RBP19.5■□□□□ 0.71
GPC1-205ENST00000427506 OLFM2O95897 454 aa19.5■□□□□ 0.71
GPC1-205ENST00000427506 GALK1P51570 392 aa19.5■□□□□ 0.71
GPC1-205ENST00000427506 ZXDBP98169 803 aa19.5■□□□□ 0.71
GPC1-205ENST00000427506 HECTD3Q5T447 861 aa19.5■□□□□ 0.71
GPC1-205ENST00000427506 FSTL4Q6MZW2 842 aa19.5■□□□□ 0.71
GPC1-205ENST00000427506 DDX42Q86XP3 938 aaKnown RBP eCLIP19.5■□□□□ 0.71
GPC1-205ENST00000427506 ZC3H3Q8IXZ2 948 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms