RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 MIPP30301 263 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 GJC1P36383 396 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 FLT3P36888 993 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 PTPN9P43378 593 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 TFDP3Q5H9I0 405 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 EFHC1Q5JVL4 640 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 C1orf53Q5VUE5 145 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 TXNRD3NBQ6F5E7 133 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 TRNP1Q6NT89 227 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 PIGZQ86VD9 579 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 GSPT2Q8IYD1 628 aaKnown RBP15.12■□□□□ 0.01
CDK3-201ENST00000425876 DBF4BQ8NFT6 615 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 IFT81Q8WYA0 676 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 RAPGEF5Q92565 580 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 RNF25Q96BH1 459 aaPredicted RBP15.12■□□□□ 0.01
CDK3-201ENST00000425876 TOX2Q96NM4 488 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 HERPUD2Q9BSE4 406 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 B3GNT5Q9BYG0 378 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 ACBD3Q9H3P7 528 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 NFU1Q9UMS0 254 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 USP18Q9UMW8 372 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 hCG_1818297A0A087WSY0 165 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 C3orf70A6NLC5 250 aaPredicted RBP15.11■□□□□ 0.01
CDK3-201ENST00000425876 PIK3R2O00459 728 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 IBSPP21815 317 aaPredicted RBP15.11■□□□□ 0.01
CDK3-201ENST00000425876 IL1R2P27930 398 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 SDC4P31431 198 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 CDKN2BP42772 138 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 CCDC14Q49A88 953 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 ZFYVE27Q5T4F4 411 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 FAM171BQ6P995 826 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 DRICH1Q6PGQ1 229 aaPredicted RBP15.11■□□□□ 0.01
CDK3-201ENST00000425876 CLEC20AQ6ZU45 233 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 CCDC105Q8IYK2 499 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 MREGQ8N565 214 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 GRK7Q8WTQ7 553 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 TBCBQ99426 244 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 RTP3Q9BQQ7 232 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 MED10Q9BTT4 135 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 HEMGNQ9BXL5 484 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 FAM129AQ9BZQ8 928 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 PCDHB8Q9UN66 801 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 TIMM13Q9Y5L4 95 aaPredicted RBP15.11■□□□□ 0.01
CDK3-201ENST00000425876 MYBPHLA2RUH7 354 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 LRRD1A4D1F6 860 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 ECEL1O95672 775 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 CXCL10P02778 98 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 ECHS1P30084 290 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 TNNT3P45378 269 aaPredicted RBP15.11■□□□□ 0.01
CDK3-201ENST00000425876 BRCC3P46736 316 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 MAPRE1Q15691 268 aaKnown RBP15.11■□□□□ 0.01
CDK3-201ENST00000425876 BOLA3Q53S33 107 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 INTS6LQ5JSJ4 861 aaKnown RBP15.11■□□□□ 0.01
CDK3-201ENST00000425876 SLC39A5Q6ZMH5 540 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 SND1Q7KZF4 910 aaKnown RBP eCLIP15.11■□□□□ 0.01
CDK3-201ENST00000425876 ANKS1BQ7Z6G8 1248 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 FAM35AQ86V20 835 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 COLGALT2Q8IYK4 626 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 KRT222Q8N1A0 295 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 THEM5Q8N1Q8 247 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 ATL2Q8NHH9 583 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 TEKT4Q8WW24 435 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 CENPIQ92674 756 aaPredicted RBP15.11■□□□□ 0.01
CDK3-201ENST00000425876 PCED1BQ96HM7 432 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 C11orf84Q9BUA3 381 aaPredicted RBP15.11■□□□□ 0.01
CDK3-201ENST00000425876 DDX23Q9BUQ8 820 aaKnown RBP15.11■□□□□ 0.01
CDK3-201ENST00000425876 FRMD8P1Q9BZ68 369 aaPredicted RBP15.11■□□□□ 0.01
CDK3-201ENST00000425876 PLEKHA4Q9H4M7 779 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 TBC1D13Q9NVG8 400 aa15.11■□□□□ 0.01
CDK3-201ENST00000425876 PI4K2BG5E9Z4 385 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 CLDN5O00501 218 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 DAPK3O43293 454 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 HOXA2O43364 376 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 PRPSAP2O60256 369 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 PQBP1O60828 265 aaKnown RBP15.1■□□□□ 0.01
CDK3-201ENST00000425876 HSF2BPO75031 334 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 GRAP2O75791 330 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 DDHD2O94830 711 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 ENDOD1O94919 500 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 FBXO21O94952 628 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 LCP1P13796 627 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 KDELR1P24390 212 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 MNX1P50219 401 aaPredicted RBP15.1■□□□□ 0.01
CDK3-201ENST00000425876 MLLT1Q03111 559 aaPredicted RBP15.1■□□□□ 0.01
CDK3-201ENST00000425876 TAF5Q15542 800 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 TRADDQ15628 312 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 OVOS1Q6IE37 1185 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 VSIG1Q86XK7 387 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 ZNF280BQ86YH2 543 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 C1orf54Q8WWF1 131 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 SMARCD1Q96GM5 515 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 PKMYT1Q99640 499 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 TRIM51Q9BSJ1 452 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 ZWILCHQ9H900 591 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 LRRC4Q9HBW1 653 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 CSNK1G1Q9HCP0 422 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 CHST7Q9NS84 486 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 KRT82Q9NSB4 513 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 KLHL11Q9NVR0 708 aa15.1■□□□□ 0.01
CDK3-201ENST00000425876 PCDHB7Q9Y5E2 793 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms