RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 HBP1O60381 514 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 LGR5O75473 907 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 HOXC6P09630 235 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 OSBPP22059 807 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 TTLL4Q14679 1199 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 ANKRD20A2Q5SQ80 823 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 ANKRD20A1Q5TYW2 823 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 ANKRD20A3Q5VUR7 823 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 DENND1BQ6P3S1 775 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 VSIG1Q86XK7 387 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 ANKRD13AQ8IZ07 590 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 MAB21L3Q8N8X9 362 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 DDX56Q9NY93 547 aaKnown RBP13.58□□□□□ -0.24
COL12A1-205ENST00000425443 STARD13Q9Y3M8 1113 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 ACTL7BQ9Y614 415 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 CLUHO75153 1309 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 MAGEB2O15479 319 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 TYROBPO43914 113 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 ABHD2P08910 425 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 RFC1P35251 1148 aaPredicted RBP13.57□□□□□ -0.24
COL12A1-205ENST00000425443 C10orf82Q8WW14 230 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 HSPH1Q92598 858 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 KCNN1Q92952 543 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 RSRC1Q96IZ7 334 aaKnown RBP13.57□□□□□ -0.24
COL12A1-205ENST00000425443 NACA2Q9H009 215 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 PDGFCQ9NRA1 345 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 KANSL3Q9P2N6 904 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 A0A0G2JLL6 359 aaPredicted RBP13.57□□□□□ -0.24
COL12A1-205ENST00000425443 TCRBV7S3A2A0A539 114 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 FAM189A1O60320 539 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 EDF1O60869 148 aaKnown RBP13.57□□□□□ -0.24
COL12A1-205ENST00000425443 ITGB3P05106 788 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 CD48P09326 243 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 EPHB2P29323 1055 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 OVGP1Q12889 678 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 SEPT7Q16181 437 aaKnown RBP13.57□□□□□ -0.24
COL12A1-205ENST00000425443 EAPPQ56P03 285 aaPredicted RBP13.57□□□□□ -0.24
COL12A1-205ENST00000425443 FNBP1LQ5T0N5 605 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 RNASEH2BQ5TBB1 312 aaKnown RBP13.57□□□□□ -0.24
COL12A1-205ENST00000425443 OTOAQ7RTW8 1153 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 PRRT2Q7Z6L0 340 aaPredicted RBP13.57□□□□□ -0.24
COL12A1-205ENST00000425443 TMEM192Q8IY95 271 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 TTC8Q8TAM2 541 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 CFAP57Q96MR6 1250 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 SMC6Q96SB8 1091 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 CALN1Q9BXU9 219 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 UBAP1Q9NZ09 502 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 DCTN4Q9UJW0 460 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 TCRBV5S1A1TA0A578 114 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 ASPAP45381 313 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 PHKA2P46019 1235 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 YARSP54577 528 aaKnown RBP13.57□□□□□ -0.24
COL12A1-205ENST00000425443 TAF5Q15542 800 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 OASLQ15646 514 aaKnown RBP13.57□□□□□ -0.24
COL12A1-205ENST00000425443 BBS9Q3SYG4 887 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 FAM13CQ8NE31 585 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 FAM81AQ8TBF8 368 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 PRR11Q96HE9 360 aaPredicted RBP13.57□□□□□ -0.24
COL12A1-205ENST00000425443 CDT1Q9H211 546 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 ERAP1Q9NZ08 941 aa13.57□□□□□ -0.24
COL12A1-205ENST00000425443 PRPF4O43172 522 aaKnown RBP eCLIP13.56□□□□□ -0.24
COL12A1-205ENST00000425443 CST8O60676 142 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 PEX11AO75192 247 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 RNF8O76064 485 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 IL18RAPO95256 599 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 GJA8P48165 433 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 BASP1P80723 227 aaKnown RBP13.56□□□□□ -0.24
COL12A1-205ENST00000425443 PDK4Q16654 411 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 LRRC38Q5VT99 294 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 TRIM68Q6AZZ1 485 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 ZNF276Q8N554 614 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 WDTC1Q8N5D0 677 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 JOSD2Q8TAC2 188 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 HEXIM2Q96MH2 286 aaKnown RBP13.56□□□□□ -0.24
COL12A1-205ENST00000425443 LRMDAQ9H2I8 198 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 RNPEPQ9H4A4 650 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 MINDY3Q9H8M7 445 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 CYLDQ9NQC7 956 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 RBPJLQ9UBG7 517 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 LCTP09848 1927 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 ZBTB42B2RXF5 422 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 CXCL11O14625 94 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 GRAP2O75791 330 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 NFICP08651 508 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 STAG3L1P0CL83 205 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 ATP2A2P16615 1042 aaKnown RBP13.56□□□□□ -0.24
COL12A1-205ENST00000425443 KRT4P19013 534 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 GNAZP19086 355 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 ADRA1DP25100 572 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 SLC26A2P50443 739 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 CDO1Q16878 200 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 PTPN20Q4JDL3 420 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 GJC2Q5T442 439 aaPredicted RBP13.56□□□□□ -0.24
COL12A1-205ENST00000425443 LVRNQ6Q4G3 990 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 ZC3H18Q86VM9 953 aaKnown RBP13.56□□□□□ -0.24
COL12A1-205ENST00000425443 KCTD6Q8NC69 237 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 ACTL9Q8TC94 416 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 RSAD2Q8WXG1 361 aa13.56□□□□□ -0.24
COL12A1-205ENST00000425443 METTL5Q9NRN9 209 aaKnown RBP13.56□□□□□ -0.24
COL12A1-205ENST00000425443 PRMT7Q9NVM4 692 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms