RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 CNOT6LQ96LI5 555 aaKnown RBP15.98■□□□□ 0.15
ATG4B-209ENST00000425239 B3GNT5Q9BYG0 378 aa15.98■□□□□ 0.15
ATG4B-209ENST00000425239 TPSD1Q9BZJ3 242 aa15.98■□□□□ 0.15
ATG4B-209ENST00000425239 KIAA1586Q9HCI6 787 aa15.98■□□□□ 0.15
ATG4B-209ENST00000425239 AGPAT3Q9NRZ7 376 aa15.98■□□□□ 0.15
ATG4B-209ENST00000425239 IL37Q9NZH6 218 aa15.98■□□□□ 0.15
ATG4B-209ENST00000425239 AKAP13Q12802 2813 aa15.98■□□□□ 0.15
ATG4B-209ENST00000425239 TNRC6BQ9UPQ9 1833 aaKnown RBP15.97■□□□□ 0.15
ATG4B-209ENST00000425239 DMXL2Q8TDJ6 3036 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 C4orf47A7E2U8 309 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 PATE3B3GLJ2 98 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 TULP1O00294 542 aaPredicted RBP15.97■□□□□ 0.15
ATG4B-209ENST00000425239 GIPC1O14908 333 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 EIF3DO15371 548 aaKnown RBP eCLIP15.97■□□□□ 0.15
ATG4B-209ENST00000425239 STAU1O95793 577 aaKnown RBP15.97■□□□□ 0.15
ATG4B-209ENST00000425239 PTPN1P18031 435 aaKnown RBP15.97■□□□□ 0.15
ATG4B-209ENST00000425239 KIR2DL1P43626 348 aaPredicted RBP15.97■□□□□ 0.15
ATG4B-209ENST00000425239 PDE6CP51160 858 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 TAF10Q12962 218 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 PSMD6Q15008 389 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 ELF2Q15723 593 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 MDH1BQ5I0G3 518 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 EMC10Q5UCC4 262 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 FRMD1Q8N878 549 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 IL17RCQ8NAC3 791 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 RDH13Q8NBN7 331 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 TSTD1Q8NFU3 115 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 SCFD1Q8WVM8 642 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 INTS4Q96HW7 963 aaKnown RBP15.97■□□□□ 0.15
ATG4B-209ENST00000425239 HCN2Q9UL51 889 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 CPQQ9Y646 472 aa15.97■□□□□ 0.15
ATG4B-209ENST00000425239 SGK1O00141 431 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 TNFRSF10BO14763 440 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 TRIM66O15016 1216 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 ADAM23O75077 832 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 EIF2DP41214 584 aaKnown RBP15.96■□□□□ 0.15
ATG4B-209ENST00000425239 SEC13P55735 322 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 MRPS21P82921 87 aaKnown RBP15.96■□□□□ 0.15
ATG4B-209ENST00000425239 CYP24A1Q07973 514 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 WDR72Q3MJ13 1102 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 USP39Q53GS9 565 aaKnown RBP15.96■□□□□ 0.15
ATG4B-209ENST00000425239 SNX30Q5VWJ9 437 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 SHC4Q6S5L8 630 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 CCDC33Q8N5R6 958 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 CCDC26Q8TAB7 109 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 PLEKHO2Q8TD55 490 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 CHAMP1Q96JM3 812 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 FNBP1Q96RU3 617 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 MMS19Q96T76 1030 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 C7orf25Q9BPX7 421 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 EDEM2Q9BV94 578 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 ZNF518BQ9C0D4 1074 aa15.96■□□□□ 0.15
ATG4B-209ENST00000425239 ZSCAN16Q9H4T2 348 aaPredicted RBP15.96■□□□□ 0.15
ATG4B-209ENST00000425239 UPF2Q9HAU5 1272 aaKnown RBP15.96■□□□□ 0.15
ATG4B-209ENST00000425239 MYO18AQ92614 2054 aaKnown RBP15.96■□□□□ 0.15
ATG4B-209ENST00000425239 FREM2Q5SZK8 3169 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 FAM92AA1XBS5 289 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 CLDN5O00501 218 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 SCAMP3O14828 347 aaKnown RBP15.95■□□□□ 0.14
ATG4B-209ENST00000425239 CLIC2O15247 247 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 PPP6R2O75170 966 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 P2RY2P41231 377 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 IRX4P78413 519 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 ANO7Q6IWH7 933 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 PSAPL1Q6NUJ1 521 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 ALLCQ8N6M5 410 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 WBP2Q969T9 261 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 KCNK16Q96T55 309 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 PNKPQ96T60 521 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 CGRRF1Q99675 332 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 DUSP9Q99956 384 aaKnown RBP15.95■□□□□ 0.14
ATG4B-209ENST00000425239 TMEM121BQ9BXQ6 578 aaPredicted RBP15.95■□□□□ 0.14
ATG4B-209ENST00000425239 VRTNQ9H8Y1 702 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 SMPD4Q9NXE4 827 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 MBD1Q9UIS9 605 aaPredicted RBP15.95■□□□□ 0.14
ATG4B-209ENST00000425239 PLXND1Q9Y4D7 1925 aa15.95■□□□□ 0.14
ATG4B-209ENST00000425239 GREM1O60565 184 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 KAT7O95251 611 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 ZDHHC11BP0C7U3 371 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 DLATP10515 647 aaKnown RBP15.94■□□□□ 0.14
ATG4B-209ENST00000425239 TNNI1P19237 187 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 KCNA4P22459 653 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 ANXA13P27216 316 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 CASP1P29466 404 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 PGFP49763 221 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 MYL6P60660 151 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 SNRPFP62306 86 aaKnown RBP15.94■□□□□ 0.14
ATG4B-209ENST00000425239 CLDN10P78369 228 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 STXBP4Q6ZWJ1 553 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 HS2ST1Q7LGA3 356 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 C11orf74Q86VG3 221 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 ETFBKMTQ8IXQ9 262 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 C12orf56Q8IXR9 622 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 NUP93Q8N1F7 819 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 TXNDC5Q8NBS9 432 aaKnown RBP15.94■□□□□ 0.14
ATG4B-209ENST00000425239 B3GALNT2Q8NCR0 500 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 OR6B3Q8NGW1 331 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 SCAMP5Q8TAC9 235 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 CUEDC2Q9H467 287 aa15.94■□□□□ 0.14
ATG4B-209ENST00000425239 TMEM74BQ9NUR3 256 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms