RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 UBR7Q8N806 425 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 ARL14EPQ8N8R7 260 aaPredicted RBP23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 TMEM105Q8N8V8 129 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 EHBP1Q8NDI1 1231 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 KAT5Q92993 513 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 ZFYVE19Q96K21 471 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 CYP2S1Q96SQ9 504 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 KIF9Q9HAQ2 790 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 ZNF840PA6NDX5 716 aa23.62■■□□□ 1.37
PTCHD3P2-201ENST00000424937 AOC1P19801 751 aa23.62■■□□□ 1.37
PTCHD3P2-201ENST00000424937 CLCN5P51795 746 aa23.62■■□□□ 1.37
PTCHD3P2-201ENST00000424937 ARHGAP29Q52LW3 1261 aa23.62■■□□□ 1.37
PTCHD3P2-201ENST00000424937 PHLDB3Q6NSJ2 640 aa23.62■■□□□ 1.37
PTCHD3P2-201ENST00000424937 TTC16Q8NEE8 873 aa23.62■■□□□ 1.37
PTCHD3P2-201ENST00000424937 PDZD8Q8NEN9 1154 aa23.62■■□□□ 1.37
PTCHD3P2-201ENST00000424937 ARNTLO00327 626 aa23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 PDE6CP51160 858 aa23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 STARD6P59095 220 aa23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 ZNF268Q14587 947 aaPredicted RBP23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 CT47A1Q5JQC4 288 aaPredicted RBP23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 ARHGAP17Q68EM7 881 aa23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 TMEM270Q6UE05 265 aa23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 SASS6Q6UVJ0 657 aa23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 RRAGAQ7L523 313 aa23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 GPRIN1Q7Z2K8 1008 aa23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 CSGALNACT1Q8TDX6 532 aa23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 OVCA2Q8WZ82 227 aa23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 CRACR2AQ9BSW2 395 aa23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 FOXQ1Q9C009 403 aa23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 THG1LQ9NWX6 298 aaKnown RBP23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 GMIPQ9P107 970 aa23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 PCDHB4Q9Y5E5 795 aa23.61■■□□□ 1.37
PTCHD3P2-201ENST00000424937 HHLA1C9JL84 531 aa23.6■■□□□ 1.37
PTCHD3P2-201ENST00000424937 PI15O43692 258 aa23.6■■□□□ 1.37
PTCHD3P2-201ENST00000424937 CD19P15391 556 aa23.6■■□□□ 1.37
PTCHD3P2-201ENST00000424937 HDCP19113 662 aa23.6■■□□□ 1.37
PTCHD3P2-201ENST00000424937 GOLGA7BQ2TAP0 167 aa23.6■■□□□ 1.37
PTCHD3P2-201ENST00000424937 RIN3Q8TB24 985 aa23.6■■□□□ 1.37
PTCHD3P2-201ENST00000424937 DUSP16Q9BY84 665 aa23.6■■□□□ 1.37
PTCHD3P2-201ENST00000424937 FBXO44Q9H4M3 255 aa23.6■■□□□ 1.37
PTCHD3P2-201ENST00000424937 PNPLA8Q9NP80 782 aa23.6■■□□□ 1.37
PTCHD3P2-201ENST00000424937 TRPV5Q9NQA5 729 aa23.6■■□□□ 1.37
PTCHD3P2-201ENST00000424937 COMMD8Q9NX08 183 aa23.6■■□□□ 1.37
PTCHD3P2-201ENST00000424937 IL37Q9NZH6 218 aa23.6■■□□□ 1.37
PTCHD3P2-201ENST00000424937 F5P12259 2224 aa23.6■■□□□ 1.37
PTCHD3P2-201ENST00000424937 MUC6Q6W4X9 2439 aa23.6■■□□□ 1.37
PTCHD3P2-201ENST00000424937 KANSL1LA0AUZ9 987 aa23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 PFKLP17858 780 aa23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 ACO1P21399 889 aaKnown RBP23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 CD72P21854 359 aa23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 PLCB2Q00722 1185 aa23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 GCNT1Q02742 428 aa23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 USP4Q13107 963 aa23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 UBXN2BQ14CS0 331 aa23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 MAN2A1Q16706 1144 aa23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 SGO2Q562F6 1265 aa23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 PJA1Q8NG27 643 aa23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 DDX23Q9BUQ8 820 aaKnown RBP23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 SAMSN1Q9NSI8 373 aaKnown RBP23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 CHORDC1Q9UHD1 332 aaPredicted RBP23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 NFE2L3Q9Y4A8 694 aa23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 PIAS3Q9Y6X2 628 aa23.59■■□□□ 1.37
PTCHD3P2-201ENST00000424937 OAS1P00973 400 aaKnown RBP23.58■■□□□ 1.37
PTCHD3P2-201ENST00000424937 PRKCSHP14314 528 aaPredicted RBP23.58■■□□□ 1.37
PTCHD3P2-201ENST00000424937 MTF1Q14872 753 aa23.58■■□□□ 1.37
PTCHD3P2-201ENST00000424937 ZNF77Q15935 545 aa23.58■■□□□ 1.37
PTCHD3P2-201ENST00000424937 STX1AQ16623 288 aa23.58■■□□□ 1.37
PTCHD3P2-201ENST00000424937 GBP6Q6ZN66 633 aa23.58■■□□□ 1.37
PTCHD3P2-201ENST00000424937 C11orf57Q6ZUT1 292 aaPredicted RBP23.58■■□□□ 1.37
PTCHD3P2-201ENST00000424937 SH3RF2Q8TEC5 729 aa23.58■■□□□ 1.37
PTCHD3P2-201ENST00000424937 KREMEN1Q96MU8 473 aa23.58■■□□□ 1.37
PTCHD3P2-201ENST00000424937 ANO10Q9NW15 660 aa23.58■■□□□ 1.37
PTCHD3P2-201ENST00000424937 TMEM63CQ9P1W3 806 aa23.58■■□□□ 1.37
PTCHD3P2-201ENST00000424937 TSPAN16Q9UKR8 245 aa23.58■■□□□ 1.37
PTCHD3P2-201ENST00000424937 ARHGAP26Q9UNA1 814 aa23.58■■□□□ 1.37
PTCHD3P2-201ENST00000424937 FAM92AA1XBS5 289 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 KCNJ18B7U540 433 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 CYP26A1O43174 497 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 VDRP11473 427 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 KPNA1P52294 538 aaPredicted RBP23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TNK2Q07912 1038 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 KCNJ12Q14500 433 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 CC2D1AQ6P1N0 951 aaPredicted RBP23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TRIM65Q6PJ69 517 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 ZNF852Q6ZMS4 543 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TTC30AQ86WT1 665 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 RBBP8NLQ8NC74 664 aaPredicted RBP23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TTC8Q8TAM2 541 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TUBGCP2Q9BSJ2 902 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 RNF38Q9H0F5 515 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 LTB4R2Q9NPC1 389 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 GKN1Q9NS71 199 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 GTSE1Q9NYZ3 720 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 SIT1Q9Y3P8 196 aa23.57■■□□□ 1.36
PTCHD3P2-201ENST00000424937 GTPBP10A4D1E9 387 aaKnown RBP23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 OLFM2O95897 454 aa23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 DCNP07585 359 aaKnown RBP23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 PAEPP09466 180 aa23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 MBL2P11226 248 aaPredicted RBP23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 SLC9A1P19634 815 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms