RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 MYO1EQ12965 1108 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 BMT2Q1RMZ1 405 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 C4orf50Q6ZRC1 276 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 PAQR9Q6ZVX9 377 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.83□□□□□ -0.2
VRK3-203ENST00000424804 FMR1NBQ8N0W7 255 aaPredicted RBP13.83□□□□□ -0.2
VRK3-203ENST00000424804 CAMKK1Q8N5S9 505 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 LOXL4Q96JB6 756 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 C8orf48Q96LL4 319 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 CEP295NLQ96MC4 621 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 FNBP1Q96RU3 617 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 CGRRF1Q99675 332 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 ARRDC1-AS1Q9H2J1 176 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 DPEP3Q9H4B8 488 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 KIAA1586Q9HCI6 787 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 ZNF840PA6NDX5 716 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 LEFTY2O00292 366 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 ATG13O75143 517 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 RPP40O75818 363 aaKnown RBP13.82□□□□□ -0.2
VRK3-203ENST00000424804 KIF20AO95235 890 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 STAU1O95793 577 aaKnown RBP13.82□□□□□ -0.2
VRK3-203ENST00000424804 ADRB1P08588 477 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 ZNF806P0C7X5 589 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 GNL1P36915 607 aaPredicted RBP13.82□□□□□ -0.2
VRK3-203ENST00000424804 NOP14P78316 857 aaKnown RBP13.82□□□□□ -0.2
VRK3-203ENST00000424804 SLC7A9P82251 487 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 SF3A2Q15428 464 aaKnown RBP13.82□□□□□ -0.2
VRK3-203ENST00000424804 CCDC6Q16204 474 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 MDH1BQ5I0G3 518 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 CEP135Q66GS9 1140 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 CC2D1AQ6P1N0 951 aaPredicted RBP13.82□□□□□ -0.2
VRK3-203ENST00000424804 DENND5BQ6ZUT9 1274 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 CEP68Q76N32 757 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 SYT13Q7L8C5 426 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 CACNA2D4Q7Z3S7 1137 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 C12orf56Q8IXR9 622 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 SMYD4Q8IYR2 804 aaPredicted RBP13.82□□□□□ -0.2
VRK3-203ENST00000424804 ADGRG2Q8IZP9 1017 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 CPA6Q8N4T0 437 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 RPLP0P6Q8NHW5 317 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 GOLGA5Q8TBA6 731 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 CD101Q93033 1021 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 HHIPQ96QV1 700 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 B3GNT5Q9BYG0 378 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 DUSP15Q9H1R2 295 aaPredicted RBP13.82□□□□□ -0.2
VRK3-203ENST00000424804 CGNQ9P2M7 1197 aaKnown RBP13.82□□□□□ -0.2
VRK3-203ENST00000424804 EBF1Q9UH73 591 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 HOOK1Q9UJC3 728 aaKnown RBP13.82□□□□□ -0.2
VRK3-203ENST00000424804 SLC8A2Q9UPR5 921 aa13.82□□□□□ -0.2
VRK3-203ENST00000424804 NUP205Q92621 2012 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 F8VP50 259 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 CLDN5O00501 218 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 DCLK1O15075 740 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 CALUO43852 315 aaPredicted RBP13.81□□□□□ -0.2
VRK3-203ENST00000424804 AKAP3O75969 853 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 RHOBTB3O94955 611 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 SMC2O95347 1197 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 OAS1P00973 400 aaKnown RBP13.81□□□□□ -0.2
VRK3-203ENST00000424804 CKMP06732 381 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 HNRNPLP14866 589 aaKnown RBP eCLIP13.81□□□□□ -0.2
VRK3-203ENST00000424804 PFKLP17858 780 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 PTPN1P18031 435 aaKnown RBP13.81□□□□□ -0.2
VRK3-203ENST00000424804 GRIK1P39086 918 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 CASP4P49662 377 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 LIMK1P53667 647 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 MYL6P60660 151 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 SNRPFP62306 86 aaKnown RBP13.81□□□□□ -0.2
VRK3-203ENST00000424804 CLDN10P78369 228 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 PLK5Q496M5 336 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 FBXO43Q4G163 708 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 ISM2Q6H9L7 571 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 SFTPA1Q8IWL2 248 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 USP33Q8TEY7 942 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 ATP2A3Q93084 1043 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 SMARCE1Q969G3 411 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 ELMO3Q96BJ8 720 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 MMS19Q96T76 1030 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 ZNF518BQ9C0D4 1074 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 SMOC1Q9H4F8 434 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 DMAC2Q9NW81 257 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 RMND1Q9NWS8 449 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 IL37Q9NZH6 218 aa13.81□□□□□ -0.2
VRK3-203ENST00000424804 TNFRSF10BO14763 440 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 PHACTR2O75167 634 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 VNN1O95497 513 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 NR3C1P04150 777 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 IFNAR2P48551 515 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 CDH8P55286 799 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 AMPD2Q01433 879 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 CYP27A1Q02318 531 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 DMC1Q14565 340 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 KCNB1Q14721 858 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 MAPRE1Q15691 268 aaKnown RBP13.8□□□□□ -0.2
VRK3-203ENST00000424804 WDR72Q3MJ13 1102 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 PPM1JQ5JR12 505 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 KIAA1958Q8N8K9 716 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 ENGASEQ8NFI3 743 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 ZFRQ96KR1 1074 aaKnown RBP13.8□□□□□ -0.2
VRK3-203ENST00000424804 SDCBP2Q9H190 292 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 KCTD10Q9H3F6 313 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms