RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 FBXO32Q969P5 355 aa27.96■■■□□ 2.07
CDK9-202ENST00000421939 TMEM176AQ96HP8 235 aa27.96■■■□□ 2.07
CDK9-202ENST00000421939 ZFYVE19Q96K21 471 aa27.96■■■□□ 2.07
CDK9-202ENST00000421939 THG1LQ9NWX6 298 aaKnown RBP27.96■■■□□ 2.07
CDK9-202ENST00000421939 MYH10P35580 1976 aa27.95■■■□□ 2.07
CDK9-202ENST00000421939 PFKLP17858 780 aa27.95■■■□□ 2.06
CDK9-202ENST00000421939 PLCB2Q00722 1185 aa27.95■■■□□ 2.06
CDK9-202ENST00000421939 CLEC20AQ6ZU45 233 aa27.95■■■□□ 2.06
CDK9-202ENST00000421939 ARL14EPQ8N8R7 260 aaPredicted RBP27.95■■■□□ 2.06
CDK9-202ENST00000421939 LMO3Q8TAP4 145 aa27.95■■■□□ 2.06
CDK9-202ENST00000421939 HEXIM2Q96MH2 286 aaKnown RBP27.95■■■□□ 2.06
CDK9-202ENST00000421939 CYP2S1Q96SQ9 504 aa27.95■■■□□ 2.06
CDK9-202ENST00000421939 COMMD8Q9NX08 183 aa27.95■■■□□ 2.06
CDK9-202ENST00000421939 IL37Q9NZH6 218 aa27.95■■■□□ 2.06
CDK9-202ENST00000421939 SIT1Q9Y3P8 196 aa27.95■■■□□ 2.06
CDK9-202ENST00000421939 TPD52L1Q16890 204 aaPredicted RBP27.94■■■□□ 2.06
CDK9-202ENST00000421939 PPP1R26Q5T8A7 1209 aaPredicted RBP27.94■■■□□ 2.06
CDK9-202ENST00000421939 RIN3Q8TB24 985 aa27.94■■■□□ 2.06
CDK9-202ENST00000421939 OVCA2Q8WZ82 227 aa27.94■■■□□ 2.06
CDK9-202ENST00000421939 LTB4R2Q9NPC1 389 aa27.94■■■□□ 2.06
CDK9-202ENST00000421939 PIAS3Q9Y6X2 628 aa27.94■■■□□ 2.06
CDK9-202ENST00000421939 GALR2O43603 387 aaPredicted RBP27.93■■■□□ 2.06
CDK9-202ENST00000421939 HDCP19113 662 aa27.93■■■□□ 2.06
CDK9-202ENST00000421939 ERCC5P28715 1186 aaPredicted RBP27.93■■■□□ 2.06
CDK9-202ENST00000421939 USP4Q13107 963 aa27.93■■■□□ 2.06
CDK9-202ENST00000421939 UBXN2BQ14CS0 331 aa27.93■■■□□ 2.06
CDK9-202ENST00000421939 ZNF852Q6ZMS4 543 aa27.93■■■□□ 2.06
CDK9-202ENST00000421939 IRF2BP1Q8IU81 584 aa27.93■■■□□ 2.06
CDK9-202ENST00000421939 PPM1KQ8N3J5 372 aa27.93■■■□□ 2.06
CDK9-202ENST00000421939 UBR7Q8N806 425 aa27.93■■■□□ 2.06
CDK9-202ENST00000421939 JAKMIP2Q96AA8 810 aa27.93■■■□□ 2.06
CDK9-202ENST00000421939 PNPLA8Q9NP80 782 aa27.93■■■□□ 2.06
CDK9-202ENST00000421939 ARHGAP26Q9UNA1 814 aa27.93■■■□□ 2.06
CDK9-202ENST00000421939 F5P12259 2224 aa27.93■■■□□ 2.06
CDK9-202ENST00000421939 FAM92AA1XBS5 289 aa27.92■■■□□ 2.06
CDK9-202ENST00000421939 MBD3O95983 291 aa27.92■■■□□ 2.06
CDK9-202ENST00000421939 ABL1P00519 1130 aa27.92■■■□□ 2.06
CDK9-202ENST00000421939 CD72P21854 359 aa27.92■■■□□ 2.06
CDK9-202ENST00000421939 ZNF77Q15935 545 aa27.92■■■□□ 2.06
CDK9-202ENST00000421939 ARHGAP17Q68EM7 881 aa27.92■■■□□ 2.06
CDK9-202ENST00000421939 RBM43Q6ZSC3 357 aaKnown RBP27.92■■■□□ 2.06
CDK9-202ENST00000421939 CREBRFQ8IUR6 639 aa27.92■■■□□ 2.06
CDK9-202ENST00000421939 CCDC105Q8IYK2 499 aa27.92■■■□□ 2.06
CDK9-202ENST00000421939 INTS2Q9H0H0 1204 aaKnown RBP27.92■■■□□ 2.06
CDK9-202ENST00000421939 FBXO44Q9H4M3 255 aa27.92■■■□□ 2.06
CDK9-202ENST00000421939 THAP9Q9H5L6 903 aa27.92■■■□□ 2.06
CDK9-202ENST00000421939 MRPS17Q9Y2R5 130 aaKnown RBP27.92■■■□□ 2.06
CDK9-202ENST00000421939 HELZP42694 1942 aaKnown RBP27.91■■■□□ 2.06
CDK9-202ENST00000421939 MIA3Q5JRA6 1907 aa27.91■■■□□ 2.06
CDK9-202ENST00000421939 CACNA1HO95180 2353 aa27.91■■■□□ 2.06
CDK9-202ENST00000421939 SHISA7A6NL88 538 aa27.91■■■□□ 2.06
CDK9-202ENST00000421939 HHLA1C9JL84 531 aa27.91■■■□□ 2.06
CDK9-202ENST00000421939 MAN2B1O00754 1011 aa27.91■■■□□ 2.06
CDK9-202ENST00000421939 OAS1P00973 400 aaKnown RBP27.91■■■□□ 2.06
CDK9-202ENST00000421939 DCNP07585 359 aaKnown RBP27.91■■■□□ 2.06
CDK9-202ENST00000421939 GLULP15104 373 aa27.91■■■□□ 2.06
CDK9-202ENST00000421939 PTPN5P54829 565 aa27.91■■■□□ 2.06
CDK9-202ENST00000421939 MTF1Q14872 753 aa27.91■■■□□ 2.06
CDK9-202ENST00000421939 GPRIN1Q7Z2K8 1008 aa27.91■■■□□ 2.06
CDK9-202ENST00000421939 EHBP1Q8NDI1 1231 aa27.91■■■□□ 2.06
CDK9-202ENST00000421939 MSANTD3Q96H12 275 aa27.91■■■□□ 2.06
CDK9-202ENST00000421939 DUSP16Q9BY84 665 aa27.91■■■□□ 2.06
CDK9-202ENST00000421939 OSBPL6Q9BZF3 934 aa27.91■■■□□ 2.06
CDK9-202ENST00000421939 GMIPQ9P107 970 aa27.91■■■□□ 2.06
CDK9-202ENST00000421939 OLFM2O95897 454 aa27.9■■■□□ 2.06
CDK9-202ENST00000421939 TARSP26639 723 aaKnown RBP27.9■■■□□ 2.06
CDK9-202ENST00000421939 KPNA1P52294 538 aaPredicted RBP27.9■■■□□ 2.06
CDK9-202ENST00000421939 MLLT6P55198 1093 aaPredicted RBP27.9■■■□□ 2.06
CDK9-202ENST00000421939 GCNT1Q02742 428 aa27.9■■■□□ 2.06
CDK9-202ENST00000421939 TNK2Q07912 1038 aa27.9■■■□□ 2.06
CDK9-202ENST00000421939 TCF15Q12870 199 aa27.9■■■□□ 2.06
CDK9-202ENST00000421939 CC2D1AQ6P1N0 951 aaPredicted RBP27.9■■■□□ 2.06
CDK9-202ENST00000421939 ARHGEF19Q8IW93 802 aa27.9■■■□□ 2.06
CDK9-202ENST00000421939 FAM114A1Q8IWE2 563 aa27.9■■■□□ 2.06
CDK9-202ENST00000421939 DTWD2Q8NBA8 298 aa27.9■■■□□ 2.06
CDK9-202ENST00000421939 TTC16Q8NEE8 873 aa27.9■■■□□ 2.06
CDK9-202ENST00000421939 SH3RF2Q8TEC5 729 aa27.9■■■□□ 2.06
CDK9-202ENST00000421939 KAT5Q92993 513 aa27.9■■■□□ 2.06
CDK9-202ENST00000421939 FAM83CQ9BQN1 747 aa27.9■■■□□ 2.06
CDK9-202ENST00000421939 C8orf33Q9H7E9 229 aaPredicted RBP27.9■■■□□ 2.06
CDK9-202ENST00000421939 GKN1Q9NS71 199 aa27.9■■■□□ 2.06
CDK9-202ENST00000421939 GTSE1Q9NYZ3 720 aa27.9■■■□□ 2.06
CDK9-202ENST00000421939 DLGAP2Q9P1A6 1054 aa27.9■■■□□ 2.06
CDK9-202ENST00000421939 MTF2Q9Y483 593 aaPredicted RBP27.9■■■□□ 2.06
CDK9-202ENST00000421939 FAM170BA6NMN3 283 aa27.89■■■□□ 2.06
CDK9-202ENST00000421939 ZDHHC11BP0C7U3 371 aa27.89■■■□□ 2.06
CDK9-202ENST00000421939 TCF3P15923 654 aa27.89■■■□□ 2.06
CDK9-202ENST00000421939 MTIF2P46199 727 aaKnown RBP27.89■■■□□ 2.06
CDK9-202ENST00000421939 SLC7A9P82251 487 aa27.89■■■□□ 2.06
CDK9-202ENST00000421939 CT47A1Q5JQC4 288 aaPredicted RBP27.89■■■□□ 2.06
CDK9-202ENST00000421939 NELL2Q99435 816 aa27.89■■■□□ 2.06
CDK9-202ENST00000421939 CHORDC1Q9UHD1 332 aaPredicted RBP27.89■■■□□ 2.06
CDK9-202ENST00000421939 MYO16Q9Y6X6 1858 aa27.89■■■□□ 2.05
CDK9-202ENST00000421939 CD19P15391 556 aa27.88■■■□□ 2.05
CDK9-202ENST00000421939 ACO1P21399 889 aaKnown RBP27.88■■■□□ 2.05
CDK9-202ENST00000421939 SOX9P48436 509 aa27.88■■■□□ 2.05
CDK9-202ENST00000421939 SGO2Q562F6 1265 aa27.88■■■□□ 2.05
CDK9-202ENST00000421939 SNX30Q5VWJ9 437 aa27.88■■■□□ 2.05
CDK9-202ENST00000421939 C1orf228Q6PIY5 440 aa27.88■■■□□ 2.05
CDK9-202ENST00000421939 TMEM270Q6UE05 265 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms