RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 RNF38Q9H0F5 515 aa19.85■□□□□ 0.77
AC004540.1-203ENST00000421862 XYLT2Q9H1B5 865 aa19.85■□□□□ 0.77
AC004540.1-203ENST00000421862 DPEP3Q9H4B8 488 aa19.85■□□□□ 0.77
AC004540.1-203ENST00000421862 MMP17Q9ULZ9 603 aa19.85■□□□□ 0.77
AC004540.1-203ENST00000421862 CPQQ9Y646 472 aa19.85■□□□□ 0.77
AC004540.1-203ENST00000421862 DCLK1O15075 740 aa19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 KRT37O76014 449 aa19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 RHOBTB1O94844 696 aa19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 TNNI1P19237 187 aa19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 GNL1P36915 607 aaPredicted RBP19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 SHC2P98077 582 aa19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 PSMD2Q13200 908 aa19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 TCEAL6Q6IPX3 200 aa19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 C11orf74Q86VG3 221 aa19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 IQUBQ8NA54 791 aa19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 TCEAL3Q969E4 200 aa19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 FNBP1Q96RU3 617 aa19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 LSM14BQ9BX40 385 aaKnown RBP19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 ZNF518BQ9C0D4 1074 aa19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 SNX25Q9H3E2 840 aa19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 VRTNQ9H8Y1 702 aa19.84■□□□□ 0.77
AC004540.1-203ENST00000421862 ANTXRLA6NF34 631 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 K7ELQ4 463 aaPredicted RBP19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 CUTAO60888 179 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 PTPN1P18031 435 aaKnown RBP19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 PI4KAP42356 2102 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 DGKEP52429 567 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 TNNC1P63316 161 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 TAF10Q12962 218 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 WDR72Q3MJ13 1102 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 ADGRG2Q8IZP9 1017 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 RDH13Q8NBN7 331 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 B3GALNT2Q8NCR0 500 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 MDGA1Q8NFP4 955 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 OR6B3Q8NGW1 331 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 OVCA2Q8WZ82 227 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 ZNF516Q92618 1163 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 SLITRK1Q96PX8 696 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 EDEM2Q9BV94 578 aa19.83■□□□□ 0.77
AC004540.1-203ENST00000421862 FRYQ5TBA9 3013 aa19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 SLC9A3R1O14745 358 aaPredicted RBP19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 CLIC2O15247 247 aa19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 ATICP31939 592 aa19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 CYP2J2P51589 502 aa19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 MRPS21P82921 87 aaKnown RBP19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 MESP2Q0VG99 397 aa19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 DHCR24Q15392 516 aa19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 CRY1Q16526 586 aa19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 ST3GAL2Q16842 350 aa19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 N4BP2L1Q5TBK1 243 aaPredicted RBP19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 HS2ST1Q7LGA3 356 aa19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 DDX42Q86XP3 938 aaKnown RBP eCLIP19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 OLIG1Q8TAK6 271 aa19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 CCDC127Q96BQ5 260 aa19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 ZFRQ96KR1 1074 aaKnown RBP19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 DUSP9Q99956 384 aaKnown RBP19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 B3GNT5Q9BYG0 378 aa19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 TPSD1Q9BZJ3 242 aa19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 CGNQ9P2M7 1197 aaKnown RBP19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 ANGPTL2Q9UKU9 493 aa19.82■□□□□ 0.76
AC004540.1-203ENST00000421862 LNP1A1A4G5 178 aa19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 HNRNPLP14866 589 aaKnown RBP eCLIP19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 SEC13P55735 322 aa19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 MYL6P60660 151 aa19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 CREB5Q02930 508 aa19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 HSF5Q4G112 596 aaPredicted RBP19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 C2orf27AQ580R0 203 aa19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 TDRD10Q5VZ19 366 aaKnown RBP19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 RNF43Q68DV7 783 aa19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 C12orf40Q86WS4 652 aa19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 NELFCDQ8IXH7 590 aa19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 PHTF2Q8N3S3 785 aa19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 PDZD8Q8NEN9 1154 aa19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 PLEKHO2Q8TD55 490 aa19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 SYAP1Q96A49 352 aaPredicted RBP19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 ZNF396Q96N95 335 aaPredicted RBP19.81■□□□□ 0.76
AC004540.1-203ENST00000421862 CFAP47Q6ZTR5 3102 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 A0A0A0MRY4 1105 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 FAM92AA1XBS5 289 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 A8MXQ7 604 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 CLDN5O00501 218 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 RTN3O95197 1032 aaPredicted RBP19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 KCNK5O95279 499 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 CAVIN2O95810 425 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 BCKDHBP21953 392 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 KIR2DL1P43626 348 aaPredicted RBP19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 CLDN10P78369 228 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 USP39Q53GS9 565 aaKnown RBP19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 SNX30Q5VWJ9 437 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 ANO7Q6IWH7 933 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 RHBDF2Q6PJF5 856 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 TMEM92Q6UXU6 159 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 FAM35AQ86V20 835 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 SFTPA1Q8IWL2 248 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 NUP93Q8N1F7 819 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 IL17RCQ8NAC3 791 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 TMEM174Q8WUU8 243 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 SMYD3Q9H7B4 428 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 FOXD4L1Q9NU39 408 aa19.8■□□□□ 0.76
AC004540.1-203ENST00000421862 SMPD4Q9NXE4 827 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms