RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 BCAT1P54687 386 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 PTK2Q05397 1052 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 BST2Q10589 180 aaKnown RBP16.64■□□□□ 0.25
BRAT1-202ENST00000421712 TDGQ13569 410 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 HTR4Q13639 388 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 CNGA2Q16280 664 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 PTPN21Q16825 1174 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 TANGO2Q6ICL3 276 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 POTEHQ6S545 545 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 APTXQ7Z2E3 356 aaKnown RBP16.64■□□□□ 0.25
BRAT1-202ENST00000421712 TMEM150AQ86TG1 271 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 ARID3BQ8IVW6 561 aaPredicted RBP16.64■□□□□ 0.25
BRAT1-202ENST00000421712 SHC3Q92529 594 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 FGF14Q92915 247 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 ASB16Q96NS5 453 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 TTLL2Q9BWV7 592 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 SLC46A2Q9BY10 475 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 PLCB1Q9NQ66 1216 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 COMMD8Q9NX08 183 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 SORCS3Q9UPU3 1222 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 CNTN6Q9UQ52 1028 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 CUL9Q8IWT3 2517 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 GREB1Q4ZG55 1949 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 POLR2FP61218 127 aaKnown RBP16.63■□□□□ 0.25
BRAT1-202ENST00000421712 PDE4CQ08493 712 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 LCLAT1Q6UWP7 414 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 GPRIN1Q7Z2K8 1008 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 PIGZQ86VD9 579 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 MON1AQ86VX9 555 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 TTC30AQ86WT1 665 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 SLC44A3Q8N4M1 653 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 TTC16Q8NEE8 873 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 PDZD8Q8NEN9 1154 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 KHSRPQ92945 711 aaKnown RBP eCLIP16.63■□□□□ 0.25
BRAT1-202ENST00000421712 RPP25Q9BUL9 199 aaKnown RBP16.63■□□□□ 0.25
BRAT1-202ENST00000421712 STK33Q9BYT3 514 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 LRRC4Q9HBW1 653 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 PNPLA8Q9NP80 782 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 ACP6Q9NPH0 428 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 NLRC4Q9NPP4 1024 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 RTN4Q9NQC3 1192 aaKnown RBP16.63■□□□□ 0.25
BRAT1-202ENST00000421712 ZMYM5Q9UJ78 669 aa16.63■□□□□ 0.25
BRAT1-202ENST00000421712 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.63■□□□□ 0.25
BRAT1-202ENST00000421712 TRAV19A0A0A6YYK7 116 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 HHLA1C9JL84 531 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 XPO1O14980 1071 aaKnown RBP16.62■□□□□ 0.25
BRAT1-202ENST00000421712 TEX33O43247 280 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 TADA3O75528 432 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 PNMA6AP0CW24 399 aaPredicted RBP16.62■□□□□ 0.25
BRAT1-202ENST00000421712 SETSIPP0DME0 302 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 VIPR2P41587 438 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 BPIFB4P59827 614 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 FANCCQ00597 558 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 DPY19L2P1Q6NXN4 242 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 CMTM8Q8IZV2 173 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 RNF214Q8ND24 703 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 ZNF606Q8WXB4 792 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 ELSPBP1Q96BH3 223 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 SPAG5Q96R06 1193 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 ERGIC2Q96RQ1 377 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 UBXN6Q9BZV1 441 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 SMG9Q9H0W8 520 aaKnown RBP16.62■□□□□ 0.25
BRAT1-202ENST00000421712 GMIPQ9P107 970 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 SIK3Q9Y2K2 1263 aa16.62■□□□□ 0.25
BRAT1-202ENST00000421712 ZNF638Q14966 1978 aaKnown RBP16.62■□□□□ 0.25
BRAT1-202ENST00000421712 NCOR1O75376 2440 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 C2orf78A6NCI8 922 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 ZNF840PA6NDX5 716 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 HEPACAM2A8MVW5 462 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 TULP2O00295 520 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 ECI2O75521 394 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 CKMP06732 381 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 HDCP19113 662 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 KRT9P35527 623 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 PDE6CP51160 858 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 KIF11P52732 1056 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 UBASH3AP57075 661 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 ZXDAP98168 799 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 GRM2Q14416 872 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 CACNA2D4Q7Z3S7 1137 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 YAF2Q8IY57 180 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 UBALD2Q8IYN6 164 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 ARL14EPQ8N8R7 260 aaPredicted RBP16.61■□□□□ 0.25
BRAT1-202ENST00000421712 OVCA2Q8WZ82 227 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 SECISBP2LQ93073 1101 aaKnown RBP16.61■□□□□ 0.25
BRAT1-202ENST00000421712 E2F7Q96AV8 911 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 NAP1L5Q96NT1 182 aaPredicted RBP16.61■□□□□ 0.25
BRAT1-202ENST00000421712 CYP2S1Q96SQ9 504 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 ZSWIM1Q9BR11 485 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 PLA2G2FQ9BZM2 168 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 NACA2Q9H009 215 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 GANQ9H2C0 597 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 PDCL3Q9H2J4 239 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 SMOC2Q9H3U7 446 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 TLR8Q9NR97 1041 aaKnown RBP16.61■□□□□ 0.25
BRAT1-202ENST00000421712 IL37Q9NZH6 218 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 SCML2Q9UQR0 700 aa16.61■□□□□ 0.25
BRAT1-202ENST00000421712 PI4K2BG5E9Z4 385 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 NARSO43776 548 aaKnown RBP16.6■□□□□ 0.25
BRAT1-202ENST00000421712 USP17L7P0C7H9 530 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms