RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 NOMO3P69849 1222 aa18.5■□□□□ 0.55
LINC00271-201ENST00000421378 CES5AQ6NT32 575 aa18.5■□□□□ 0.55
LINC00271-201ENST00000421378 CYP26C1Q6V0L0 522 aa18.5■□□□□ 0.55
LINC00271-201ENST00000421378 WDTC1Q8N5D0 677 aa18.5■□□□□ 0.55
LINC00271-201ENST00000421378 SCAMP5Q8TAC9 235 aa18.5■□□□□ 0.55
LINC00271-201ENST00000421378 STK32AQ8WU08 396 aa18.5■□□□□ 0.55
LINC00271-201ENST00000421378 KCTD13Q8WZ19 329 aa18.5■□□□□ 0.55
LINC00271-201ENST00000421378 HLA-CQ95604 372 aa18.5■□□□□ 0.55
LINC00271-201ENST00000421378 HSFY1Q96LI6 401 aa18.5■□□□□ 0.55
LINC00271-201ENST00000421378 PANX2Q96RD6 677 aa18.5■□□□□ 0.55
LINC00271-201ENST00000421378 ADAM7Q9H2U9 754 aa18.5■□□□□ 0.55
LINC00271-201ENST00000421378 LRRC4Q9HBW1 653 aa18.5■□□□□ 0.55
LINC00271-201ENST00000421378 CYTH4Q9UIA0 394 aa18.5■□□□□ 0.55
LINC00271-201ENST00000421378 BRWD1Q9NSI6 2320 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.49■□□□□ 0.55
LINC00271-201ENST00000421378 H3BQ06 376 aaPredicted RBP18.49■□□□□ 0.55
LINC00271-201ENST00000421378 CYP1A1P04798 512 aaPredicted RBP18.49■□□□□ 0.55
LINC00271-201ENST00000421378 HMGA1P17096 107 aaKnown RBP18.49■□□□□ 0.55
LINC00271-201ENST00000421378 TNFAIP3P21580 790 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 USP46P62068 366 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 ADIGQ0VDE8 80 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 RAB41Q5JT25 222 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 NAA35Q5VZE5 725 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 GPR149Q86SP6 731 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 SMRP1Q8NCR6 262 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 FEZF2Q8TBJ5 459 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 TRMT2BQ96GJ1 504 aaKnown RBP18.49■□□□□ 0.55
LINC00271-201ENST00000421378 MYRFLQ96LU7 910 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 PCDHB18PQ96TA0 734 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 CORO1BQ9BR76 489 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 FBXO44Q9H4M3 255 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 ASAH2Q9NR71 780 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 HCFC1R1Q9NWW0 138 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 GREB1Q4ZG55 1949 aa18.49■□□□□ 0.55
LINC00271-201ENST00000421378 PTPN2P17706 415 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 TKTL1P51854 596 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 KIF11P52732 1056 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 GSDMDP57764 484 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 CDK17Q00537 523 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 CLUL1Q15846 466 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 GRASPQ7Z6J2 395 aaPredicted RBP18.48■□□□□ 0.55
LINC00271-201ENST00000421378 SIX6OS1Q8N1H7 587 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 OLIG1Q8TAK6 271 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 CPA5Q8WXQ8 436 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 PPP1R13BQ96KQ4 1090 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.48■□□□□ 0.55
LINC00271-201ENST00000421378 TTLL2Q9BWV7 592 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 S1PR5Q9H228 398 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 CYLDQ9NQC7 956 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 DNMT3BQ9UBC3 853 aaKnown RBP18.48■□□□□ 0.55
LINC00271-201ENST00000421378 UXTQ9UBK9 157 aaPredicted RBP18.48■□□□□ 0.55
LINC00271-201ENST00000421378 ADAMTS1Q9UHI8 967 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 CD207Q9UJ71 328 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 C2orf16Q68DN1 1984 aa18.48■□□□□ 0.55
LINC00271-201ENST00000421378 SSU72P8A0A1W2PR75 194 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 RHOP08100 348 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 UNGP13051 313 aaPredicted RBP18.47■□□□□ 0.55
LINC00271-201ENST00000421378 LCP1P13796 627 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 YWHAQP27348 245 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 ACADSBP45954 432 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 NSFP46459 744 aaKnown RBP18.47■□□□□ 0.55
LINC00271-201ENST00000421378 RPL34P49207 117 aaKnown RBP18.47■□□□□ 0.55
LINC00271-201ENST00000421378 CENPCQ03188 943 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 CLEC16AQ2KHT3 1053 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 PABPC1LQ4VXU2 614 aaKnown RBP18.47■□□□□ 0.55
LINC00271-201ENST00000421378 TMC8Q8IU68 726 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 LEMD2Q8NC56 503 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 MSANTD4Q8NCY6 345 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 IPO4Q8TEX9 1081 aaKnown RBP18.47■□□□□ 0.55
LINC00271-201ENST00000421378 SLITRK1Q96PX8 696 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 CPXM1Q96SM3 734 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 SLC4A5Q9BY07 1137 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 DEF6Q9H4E7 631 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 SYNCQ9H7C4 482 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 COMMD8Q9NX08 183 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 IL37Q9NZH6 218 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 COG5Q9UP83 839 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 USP3Q9Y6I4 520 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 C5orf42Q9H799 3197 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 FAM170AA1A519 330 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 E5RJQ4 531 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 PIK3R2O00459 728 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 DDX3XO00571 662 aaKnown RBP eCLIP18.47■□□□□ 0.55
LINC00271-201ENST00000421378 EIF4A3P38919 411 aaKnown RBP18.47■□□□□ 0.55
LINC00271-201ENST00000421378 EPHA5P54756 1037 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 SNX16P57768 344 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 MAPK8IP2Q13387 824 aaPredicted RBP18.47■□□□□ 0.55
LINC00271-201ENST00000421378 PTPN20Q4JDL3 420 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 ATAT1Q5SQI0 421 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 CYP4A22Q5TCH4 519 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 PDZD4Q76G19 769 aaPredicted RBP18.47■□□□□ 0.55
LINC00271-201ENST00000421378 TMEM110Q86TL2 294 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 HS6ST3Q8IZP7 471 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 FBXO32Q969P5 355 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 CHP1Q99653 195 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 ZNF334Q9HCZ1 680 aaPredicted RBP18.47■□□□□ 0.55
LINC00271-201ENST00000421378 CNGB3Q9NQW8 809 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 CDH22Q9UJ99 828 aa18.47■□□□□ 0.55
LINC00271-201ENST00000421378 MYO16Q9Y6X6 1858 aa18.46■□□□□ 0.55
LINC00271-201ENST00000421378 ZNF638Q14966 1978 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms