RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 CEP295NLQ96MC4 621 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 FAM161BQ96MY7 647 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 IL37Q9NZH6 218 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 INTUQ9ULD6 942 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 YIPF1Q9Y548 306 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 INSL5Q9Y5Q6 135 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 USP3Q9Y6I4 520 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 PRRG1O14668 218 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 PJA2O43164 708 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 PAPSS1O43252 624 aaPredicted RBP13.15□□□□□ -0.3
TMEM53-206ENST00000420706 TMEM253P0C7T8 217 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 EPCAMP16422 314 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 POU3F3P20264 500 aaPredicted RBP13.15□□□□□ -0.3
TMEM53-206ENST00000420706 ABCB4P21439 1286 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 ALDH1A3P47895 512 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 NRIP1P48552 1158 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 TKTL1P51854 596 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 VAV2P52735 878 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 GSCP56915 257 aaPredicted RBP13.15□□□□□ -0.3
TMEM53-206ENST00000420706 GPC5P78333 572 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 TWF1Q12792 350 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 KCNC3Q14003 757 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 CYP4A22Q5TCH4 519 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 OR6B2Q6IFH4 312 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 DENND5BQ6ZUT9 1274 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 RTL10Q7L3V2 364 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 PHLDB2Q86SQ0 1253 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 XYLT1Q86Y38 959 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 SCUBE3Q8IX30 993 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 SCAMP5Q8TAC9 235 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 GPR152Q8TDT2 470 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 IPO4Q8TEX9 1081 aaKnown RBP13.15□□□□□ -0.3
TMEM53-206ENST00000420706 PPP2R3CQ969Q6 453 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 CDCA3Q99618 268 aaPredicted RBP13.15□□□□□ -0.3
TMEM53-206ENST00000420706 MIS12Q9H081 205 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 THAP2Q9H0W7 228 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 PLEKHA4Q9H4M7 779 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 NSUN3Q9H649 340 aaKnown RBP13.15□□□□□ -0.3
TMEM53-206ENST00000420706 SYNCQ9H7C4 482 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.3
TMEM53-206ENST00000420706 COMMD8Q9NX08 183 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 WDR35Q9P2L0 1181 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 TFR2Q9UP52 801 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 HCFC2Q9Y5Z7 792 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 TRIOBPQ9H2D6 2365 aa13.15□□□□□ -0.3
TMEM53-206ENST00000420706 MYO7AQ13402 2215 aa13.15□□□□□ -0.31
TMEM53-206ENST00000420706 RANBP2P49792 3224 aaKnown RBP13.15□□□□□ -0.31
TMEM53-206ENST00000420706 A0A0U1RQJ8 604 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 TCRBV5S1A1TA0A578 114 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 RCCD1A6NED2 376 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 SLC38A8A6NNN8 435 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 ZMYND10O75800 440 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 CYP1A2P05177 515 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 C8AP07357 584 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 CCDC175P0C221 793 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 MYBL1P10243 752 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 RRM1P23921 792 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 GTF2F1P35269 517 aaKnown RBP eCLIP13.14□□□□□ -0.31
TMEM53-206ENST00000420706 SLC5A3P53794 718 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 USP46P62068 366 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 SLC6A3Q01959 620 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 ADIGQ0VDE8 80 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 PLD1Q13393 1074 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 MTMR3Q13615 1198 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 ADGRE1Q14246 886 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 TCEAL5Q5H9L2 206 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 LIN9Q5TKA1 542 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 PM20D1Q6GTS8 502 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 PLEKHA7Q6IQ23 1121 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 LLGL2Q6P1M3 1020 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 FAM183BPQ6ZVS7 135 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 Q7L0L9 218 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 KIAA1328Q86T90 577 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 SCML4Q8N228 414 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 STKLD1Q8NE28 680 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 SLC7A14Q8TBB6 771 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 ATRIPQ8WXE1 791 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 NDRG1Q92597 394 aaKnown RBP13.14□□□□□ -0.31
TMEM53-206ENST00000420706 ZNF653Q96CK0 615 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 ARHGEF26Q96DR7 871 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 MCRS1Q96EZ8 462 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 TRIM11Q96F44 468 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 ULBP1Q9BZM6 244 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 LACRTQ9GZZ8 138 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 IGFLR1Q9H665 355 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 CNGB3Q9NQW8 809 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 MAN1C1Q9NR34 630 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 CNOT8Q9UFF9 292 aaKnown RBP13.14□□□□□ -0.31
TMEM53-206ENST00000420706 STRIP2Q9ULQ0 834 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 PPP2R2CQ9Y2T4 447 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 MTCH2Q9Y6C9 303 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 MYO9BQ13459 2157 aa13.14□□□□□ -0.31
TMEM53-206ENST00000420706 PATJQ8NI35 1801 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 GREB1Q4ZG55 1949 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 FAM92AA1XBS5 289 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 FBXO21O94952 628 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 RTN3O95197 1032 aaPredicted RBP13.13□□□□□ -0.31
TMEM53-206ENST00000420706 ZBED1O96006 694 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 LRG1P02750 347 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 USP17L7P0C7H9 530 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms