RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 OR6J1Q8NGC5 347 aa16.93■□□□□ 0.3
CTSB-203ENST00000420692 UBN1Q9NPG3 1134 aa16.93■□□□□ 0.3
CTSB-203ENST00000420692 KIAA1257Q9ULG3 409 aa16.93■□□□□ 0.3
CTSB-203ENST00000420692 RALGAPA2Q2PPJ7 1873 aa16.93■□□□□ 0.3
CTSB-203ENST00000420692 MTM1Q13496 603 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 DPYSL3Q14195 570 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 HIF1AQ16665 826 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 CGB2Q6NT52 195 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 OLFML1Q6UWY5 402 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 CENPUQ71F23 418 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 RIBC1Q8N443 379 aaPredicted RBP16.92■□□□□ 0.3
CTSB-203ENST00000420692 DENND1AQ8TEH3 1009 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 DYDC1Q8WWB3 177 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 PTPN18Q99952 460 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 TINF2Q9BSI4 451 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 FAM49AQ9H0Q0 323 aaPredicted RBP16.92■□□□□ 0.3
CTSB-203ENST00000420692 VPS37BQ9H9H4 285 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.92■□□□□ 0.32e-8■□□□□ 8.5
CTSB-203ENST00000420692 RABGEF1Q9UJ41 708 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 GINS2Q9Y248 185 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 CENPFP49454 3210 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 GLTPD2A6NH11 291 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 ATP2C2O75185 946 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 SPAG7O75391 227 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 PIAS1O75925 651 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 RBP3P10745 1247 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 SSTR1P30872 391 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 HNRNPH1P31943 449 aaKnown RBP16.92■□□□□ 0.3
CTSB-203ENST00000420692 CDH6P55285 790 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 CDO1Q16878 200 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 ALKAL1Q6UXT8 129 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 SPATA18Q8TC71 538 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 RSAD2Q8WXG1 361 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 SNX27Q96L92 541 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 SLC4A5Q9BY07 1137 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 ADAM33Q9BZ11 813 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 RSAD1Q9HA92 442 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 SNX9Q9Y5X1 595 aa16.92■□□□□ 0.3
CTSB-203ENST00000420692 TRIP12Q14669 1992 aaPredicted RBP16.91■□□□□ 0.3
CTSB-203ENST00000420692 E7ESA3 106 aa16.91■□□□□ 0.3
CTSB-203ENST00000420692 GCLCP48506 637 aaPredicted RBP16.91■□□□□ 0.3
CTSB-203ENST00000420692 EFTUD2Q15029 972 aaKnown RBP eCLIP16.91■□□□□ 0.36e-10■■■■■ 37.4
CTSB-203ENST00000420692 DGKDQ16760 1214 aa16.91■□□□□ 0.3
CTSB-203ENST00000420692 PRAMEF19Q5SWL8 479 aa16.91■□□□□ 0.3
CTSB-203ENST00000420692 TAX1BP1Q86VP1 789 aa16.91■□□□□ 0.3
CTSB-203ENST00000420692 SCUBE3Q8IX30 993 aa16.91■□□□□ 0.3
CTSB-203ENST00000420692 SLC35F5Q8WV83 523 aa16.91■□□□□ 0.3
CTSB-203ENST00000420692 FAM124BQ9H5Z6 455 aaPredicted RBP16.91■□□□□ 0.3
CTSB-203ENST00000420692 ACTR5Q9H9F9 607 aaPredicted RBP16.91■□□□□ 0.3
CTSB-203ENST00000420692 ABCF3Q9NUQ8 709 aa16.91■□□□□ 0.3
CTSB-203ENST00000420692 FAM49BQ9NUQ9 324 aa16.91■□□□□ 0.3
CTSB-203ENST00000420692 GPATCH2LQ9NWQ4 482 aa16.91■□□□□ 0.3
CTSB-203ENST00000420692 A0A1W2PPM1 405 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 RASSF9O75901 435 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 GHRP10912 638 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 TFE3P19532 575 aaPredicted RBP16.9■□□□□ 0.3
CTSB-203ENST00000420692 TAC1P20366 129 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 GTF2A2P52657 109 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 ATP11AP98196 1134 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 NOMO1Q15155 1222 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 CA9Q16790 459 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 DCAF4L1Q3SXM0 396 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 ZC3H12AQ5D1E8 599 aaKnown RBP16.9■□□□□ 0.3
CTSB-203ENST00000420692 EFHC2Q5JST6 749 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 GLRA4Q5JXX5 417 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 NUGGCQ68CJ6 796 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 PCGF5Q86SE9 256 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 ANKRD23Q86SG2 305 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 TMEM110Q86TL2 294 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 IGDCC3Q8IVU1 814 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 PQLC3Q8N755 202 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 B3GNT5Q9BYG0 378 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 ABHD16BQ9H3Z7 469 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 DPEP3Q9H4B8 488 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 PLEKHA5Q9HAU0 1116 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 SAMD15Q9P1V8 674 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 GRID1Q9ULK0 1009 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 SCN4AP35499 1836 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 PAPSS1O43252 624 aaPredicted RBP16.9■□□□□ 0.3
CTSB-203ENST00000420692 ASMTLO95671 621 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 SOWAHAQ2M3V2 549 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 ZC3H18Q86VM9 953 aaKnown RBP16.9■□□□□ 0.3
CTSB-203ENST00000420692 P3H4Q92791 437 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 MRRFQ96E11 262 aaKnown RBP16.9■□□□□ 0.3
CTSB-203ENST00000420692 MAGEB18Q96M61 343 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 OSMRQ99650 979 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 NXF3Q9H4D5 531 aaKnown RBP16.9■□□□□ 0.3
CTSB-203ENST00000420692 TRABDQ9H4I3 376 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 USP29Q9HBJ7 922 aa16.9■□□□□ 0.3
CTSB-203ENST00000420692 PDCD11Q14690 1871 aaKnown RBP16.9■□□□□ 0.3
CTSB-203ENST00000420692 FAM47DPA6NHR8 397 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 IQSEC1Q6DN90 963 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 SLC27A1Q6PCB7 646 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 RNF157Q96PX1 679 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 TGS1Q96RS0 853 aaKnown RBP16.89■□□□□ 0.29
CTSB-203ENST00000420692 MAGEB5Q9BZ81 275 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.89■□□□□ 0.299e-19■□□□□ 11
CTSB-203ENST00000420692 PRKAG3Q9UGI9 489 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 DERAQ9Y315 318 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 DPYSL4O14531 572 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms