RNA–Protein interactions for RNA: ENST00000417432.1

CNOT4P1-201, Transcript of CCR4-NOT transcription complex subunit 4 pseudogene 1, humanhuman

BASIC

Gene CNOT4P1, Length 1,199 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4P1-201ENST00000417432 MAGEF1Q9HAY2 307 aa9.36□□□□□ -0.91
CNOT4P1-201ENST00000417432 SMPD4Q9NXE4 827 aa9.36□□□□□ -0.91
CNOT4P1-201ENST00000417432 PCDHGA5Q9Y5G8 931 aa9.36□□□□□ -0.91
CNOT4P1-201ENST00000417432 ADAMTS9Q9P2N4 1935 aa9.36□□□□□ -0.91
CNOT4P1-201ENST00000417432 CLIC2O15247 247 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 CUTAO60888 179 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 PHACTR2O75167 634 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 PPP6R2O75170 966 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 CYP17A1P05093 508 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 ZNF806P0C7X5 589 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 MBL2P11226 248 aaPredicted RBP9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 PFKLP17858 780 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 HOXD13P35453 343 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 GNL1P36915 607 aaPredicted RBP9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 DGKEP52429 567 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 LIMK1P53667 647 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 NOP14P78316 857 aaKnown RBP9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 CREB5Q02930 508 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 BIRC3Q13489 604 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 TRPC3Q13507 836 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 PSMD6Q15008 389 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 ZNF699Q32M78 642 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 WDR72Q3MJ13 1102 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 PLK5Q496M5 336 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 C2orf27AQ580R0 203 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 FOXD4L5Q5VV16 416 aaPredicted RBP9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 TCEAL6Q6IPX3 200 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 ANO7Q6IWH7 933 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 UNC13DQ70J99 1090 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 EPM2AIP1Q7L775 607 aaPredicted RBP9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 PKD1L2Q7Z442 2459 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 FILIP1Q7Z7B0 1213 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 TTC30AQ86WT1 665 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 XXYLT1Q8NBI6 393 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 FOXD4L4Q8WXT5 416 aaPredicted RBP9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 TCEAL3Q969E4 200 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 SLITRK1Q96PX8 696 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 EDEM2Q9BV94 578 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 TTLL2Q9BWV7 592 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 TPSD1Q9BZJ3 242 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 ZNF518BQ9C0D4 1074 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 DPEP3Q9H4B8 488 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 VPS45Q9NRW7 570 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 CFAP97Q9P2B7 532 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 CPQQ9Y646 472 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 CACNA1GO43497 2377 aa9.35□□□□□ -0.91
CNOT4P1-201ENST00000417432 ZNF840PA6NDX5 716 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 A8MXQ7 604 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 SLC9A3R1O14745 358 aaPredicted RBP9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 DCLK1O15075 740 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 EXOC3O60645 756 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 TACC1O75410 805 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 RHOBTB1O94844 696 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 ADH1CP00326 375 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 OAS1P00973 400 aaKnown RBP9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 HSP90AA1P07900 732 aaKnown RBP9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 PRR29P0C7W0 189 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 CASP1P29466 404 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 OPRD1P41143 372 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 PPP3CCP48454 512 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 MYL6P60660 151 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 SLC7A9P82251 487 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 KDSRQ06136 332 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 TAF10Q12962 218 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 FOXD4L6Q3SYB3 417 aaPredicted RBP9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 STPG1Q5TH74 334 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 TDRD10Q5VZ19 366 aaKnown RBP9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 RNF43Q68DV7 783 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 SHC4Q6S5L8 630 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 FOXD4L3Q6VB84 417 aaPredicted RBP9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 FAM35AQ86V20 835 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 DDX42Q86XP3 938 aaKnown RBP eCLIP9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 B3GALNT2Q8NCR0 500 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 ZNF507Q8TCN5 953 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 USP33Q8TEY7 942 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 SCFD1Q8WVM8 642 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 SYAP1Q96A49 352 aaPredicted RBP9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 ZC3H10Q96K80 434 aaKnown RBP9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 C8orf48Q96LL4 319 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 MED10Q9BTT4 135 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 DUSP15Q9H1R2 295 aaPredicted RBP9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 BLZF1Q9H2G9 400 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 LINC00597Q9H2U6 94 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 SMYD3Q9H7B4 428 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 RXFP3Q9NSD7 469 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 TFIP11Q9UBB9 837 aaKnown RBP9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 NXF1Q9UBU9 619 aaKnown RBP9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 EBF1Q9UH73 591 aa9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 CIZ1Q9ULV3 898 aaPredicted RBP9.34□□□□□ -0.91
CNOT4P1-201ENST00000417432 CFAP47Q6ZTR5 3102 aa9.34□□□□□ -0.92
CNOT4P1-201ENST00000417432 CLDN5O00501 218 aa9.33□□□□□ -0.92
CNOT4P1-201ENST00000417432 POLR2DO15514 142 aaKnown RBP9.33□□□□□ -0.92
CNOT4P1-201ENST00000417432 TGFB1I1O43294 461 aa9.33□□□□□ -0.92
CNOT4P1-201ENST00000417432 RTN3O95197 1032 aaPredicted RBP9.33□□□□□ -0.92
CNOT4P1-201ENST00000417432 OLFM2O95897 454 aa9.33□□□□□ -0.92
CNOT4P1-201ENST00000417432 APODP05090 189 aa9.33□□□□□ -0.92
CNOT4P1-201ENST00000417432 ADH5P11766 374 aa9.33□□□□□ -0.92
CNOT4P1-201ENST00000417432 PTPN1P18031 435 aaKnown RBP9.33□□□□□ -0.92
CNOT4P1-201ENST00000417432 ME1P48163 572 aa9.33□□□□□ -0.92
CNOT4P1-201ENST00000417432 CACNA2D1P54289 1103 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms