RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 NFIL3Q16649 462 aa26.92■■□□□ 1.9
VEGFA-208ENST00000417285 PDZD8Q8NEN9 1154 aa26.92■■□□□ 1.9
VEGFA-208ENST00000417285 OVCA2Q8WZ82 227 aa26.92■■□□□ 1.9
VEGFA-208ENST00000417285 LINC00597Q9H2U6 94 aa26.92■■□□□ 1.9
VEGFA-208ENST00000417285 CCDC163A0A0D9SF12 145 aa26.91■■□□□ 1.9
VEGFA-208ENST00000417285 GOLGA6L4A6NEF3 574 aa26.91■■□□□ 1.9
VEGFA-208ENST00000417285 PRR5-ARHGAP8B1AHC4 643 aa26.91■■□□□ 1.9
VEGFA-208ENST00000417285 NFATC1O95644 943 aa26.91■■□□□ 1.9
VEGFA-208ENST00000417285 RETP07949 1114 aa26.91■■□□□ 1.9
VEGFA-208ENST00000417285 RPL13P26373 211 aaKnown RBP26.91■■□□□ 1.9
VEGFA-208ENST00000417285 ARHGAP8P85298 464 aa26.91■■□□□ 1.9
VEGFA-208ENST00000417285 HEATR6Q6AI08 1181 aaKnown RBP26.91■■□□□ 1.9
VEGFA-208ENST00000417285 PRR23BQ6ZRT6 265 aa26.91■■□□□ 1.9
VEGFA-208ENST00000417285 SV2AQ7L0J3 742 aa26.91■■□□□ 1.9
VEGFA-208ENST00000417285 WDR5BQ86VZ2 330 aa26.91■■□□□ 1.9
VEGFA-208ENST00000417285 CD101Q93033 1021 aa26.91■■□□□ 1.9
VEGFA-208ENST00000417285 RNF38Q9H0F5 515 aa26.91■■□□□ 1.9
VEGFA-208ENST00000417285 C2orf42Q9NWW7 574 aa26.91■■□□□ 1.9
VEGFA-208ENST00000417285 COMMD8Q9NX08 183 aa26.91■■□□□ 1.9
VEGFA-208ENST00000417285 SLC8A2Q9UPR5 921 aa26.91■■□□□ 1.9
VEGFA-208ENST00000417285 ZNF638Q14966 1978 aaKnown RBP26.91■■□□□ 1.9
VEGFA-208ENST00000417285 DCHS1Q96JQ0 3298 aa26.9■■□□□ 1.9
VEGFA-208ENST00000417285 LEFTY2O00292 366 aa26.9■■□□□ 1.9
VEGFA-208ENST00000417285 CLDN5O00501 218 aa26.9■■□□□ 1.9
VEGFA-208ENST00000417285 SLC9A3R1O14745 358 aaPredicted RBP26.9■■□□□ 1.9
VEGFA-208ENST00000417285 OLFM2O95897 454 aa26.9■■□□□ 1.9
VEGFA-208ENST00000417285 ABL1P00519 1130 aa26.9■■□□□ 1.9
VEGFA-208ENST00000417285 TRIM21P19474 475 aaKnown RBP26.9■■□□□ 1.9
VEGFA-208ENST00000417285 CACNA2D1P54289 1103 aa26.9■■□□□ 1.9
VEGFA-208ENST00000417285 LMNB2Q03252 620 aa26.9■■□□□ 1.9
VEGFA-208ENST00000417285 ENPEPQ07075 957 aa26.9■■□□□ 1.9
VEGFA-208ENST00000417285 DMWDQ09019 674 aa26.9■■□□□ 1.9
VEGFA-208ENST00000417285 UNC93AQ86WB7 457 aa26.9■■□□□ 1.9
VEGFA-208ENST00000417285 CRYBG2Q8N1P7 616 aa26.9■■□□□ 1.9
VEGFA-208ENST00000417285 GUF1Q8N442 669 aaKnown RBP26.9■■□□□ 1.9
VEGFA-208ENST00000417285 CAMKK1Q8N5S9 505 aa26.9■■□□□ 1.9
VEGFA-208ENST00000417285 MED10Q9BTT4 135 aa26.9■■□□□ 1.9
VEGFA-208ENST00000417285 FBRSL1Q9HCM7 1045 aaKnown RBP26.9■■□□□ 1.9
VEGFA-208ENST00000417285 DLL3Q9NYJ7 618 aa26.9■■□□□ 1.9
VEGFA-208ENST00000417285 LRP3O75074 770 aa26.89■■□□□ 1.9
VEGFA-208ENST00000417285 EGFP01133 1207 aa26.89■■□□□ 1.9
VEGFA-208ENST00000417285 NR2F2P24468 414 aa26.89■■□□□ 1.9
VEGFA-208ENST00000417285 VAMP7P51809 220 aa26.89■■□□□ 1.9
VEGFA-208ENST00000417285 INTS8Q75QN2 995 aaKnown RBP26.89■■□□□ 1.9
VEGFA-208ENST00000417285 DDX42Q86XP3 938 aaKnown RBP eCLIP26.89■■□□□ 1.94e-7■■■□□ 19
VEGFA-208ENST00000417285 SMARCD1Q96GM5 515 aa26.89■■□□□ 1.9
VEGFA-208ENST00000417285 DMAP1Q9NPF5 467 aaPredicted RBP26.89■■□□□ 1.9
VEGFA-208ENST00000417285 TMEM30AQ9NV96 361 aa26.89■■□□□ 1.9
VEGFA-208ENST00000417285 MAPK8IP1Q9UQF2 711 aa26.89■■□□□ 1.9
VEGFA-208ENST00000417285 KIF26AQ9ULI4 1882 aaPredicted RBP26.88■■□□□ 1.89
VEGFA-208ENST00000417285 RNF40O75150 1001 aa26.88■■□□□ 1.89
VEGFA-208ENST00000417285 ASS1P00966 412 aaKnown RBP26.88■■□□□ 1.89
VEGFA-208ENST00000417285 OAS1P00973 400 aaKnown RBP26.88■■□□□ 1.89
VEGFA-208ENST00000417285 RAP1GAPP47736 663 aa26.88■■□□□ 1.89
VEGFA-208ENST00000417285 ZXDBP98169 803 aa26.88■■□□□ 1.89
VEGFA-208ENST00000417285 SCARA5Q6ZMJ2 495 aa26.88■■□□□ 1.89
VEGFA-208ENST00000417285 PAQR9Q6ZVX9 377 aa26.88■■□□□ 1.89
VEGFA-208ENST00000417285 ADGRG2Q8IZP9 1017 aa26.88■■□□□ 1.89
VEGFA-208ENST00000417285 FBXO32Q969P5 355 aa26.88■■□□□ 1.89
VEGFA-208ENST00000417285 KCNK16Q96T55 309 aa26.88■■□□□ 1.89
VEGFA-208ENST00000417285 IL37Q9NZH6 218 aa26.88■■□□□ 1.89
VEGFA-208ENST00000417285 OBSL1O75147 1896 aa26.87■■□□□ 1.89
VEGFA-208ENST00000417285 KRT13P13646 458 aa26.87■■□□□ 1.89
VEGFA-208ENST00000417285 TGM1P22735 817 aa26.87■■□□□ 1.89
VEGFA-208ENST00000417285 PSMC2P35998 433 aaKnown RBP26.87■■□□□ 1.89
VEGFA-208ENST00000417285 LPAL2Q16609 132 aa26.87■■□□□ 1.89
VEGFA-208ENST00000417285 RSPO4Q2I0M5 234 aaPredicted RBP26.87■■□□□ 1.89
VEGFA-208ENST00000417285 SNX30Q5VWJ9 437 aa26.87■■□□□ 1.89
VEGFA-208ENST00000417285 CEP68Q76N32 757 aa26.87■■□□□ 1.89
VEGFA-208ENST00000417285 DGLUCYQ7Z3D6 616 aa26.87■■□□□ 1.89
VEGFA-208ENST00000417285 ACOT1Q86TX2 421 aa26.87■■□□□ 1.89
VEGFA-208ENST00000417285 FAM35AQ86V20 835 aa26.87■■□□□ 1.89
VEGFA-208ENST00000417285 IMPG2Q9BZV3 1241 aa26.87■■□□□ 1.89
VEGFA-208ENST00000417285 SDCBP2Q9H190 292 aa26.87■■□□□ 1.89
VEGFA-208ENST00000417285 USP18Q9UMW8 372 aa26.87■■□□□ 1.89
VEGFA-208ENST00000417285 CPQQ9Y646 472 aa26.87■■□□□ 1.89
VEGFA-208ENST00000417285 TNFRSF10BO14763 440 aa26.86■■□□□ 1.89
VEGFA-208ENST00000417285 HLA-DRAP01903 254 aa26.86■■□□□ 1.89
VEGFA-208ENST00000417285 IFRD2Q12894 506 aaPredicted RBP26.86■■□□□ 1.89
VEGFA-208ENST00000417285 ADAM9Q13443 819 aa26.86■■□□□ 1.89
VEGFA-208ENST00000417285 C1orf220Q5T0J3 134 aa26.86■■□□□ 1.89
VEGFA-208ENST00000417285 PKN3Q6P5Z2 889 aa26.86■■□□□ 1.89
VEGFA-208ENST00000417285 FUKQ8N0W3 1084 aa26.86■■□□□ 1.89
VEGFA-208ENST00000417285 FMR1NBQ8N0W7 255 aaPredicted RBP26.86■■□□□ 1.89
VEGFA-208ENST00000417285 DNAI2Q9GZS0 605 aa26.86■■□□□ 1.89
VEGFA-208ENST00000417285 RMND1Q9NWS8 449 aa26.86■■□□□ 1.89
VEGFA-208ENST00000417285 TBC1D14Q9P2M4 693 aa26.86■■□□□ 1.89
VEGFA-208ENST00000417285 CHORDC1Q9UHD1 332 aaPredicted RBP26.86■■□□□ 1.89
VEGFA-208ENST00000417285 GREB1Q4ZG55 1949 aa26.85■■□□□ 1.89
VEGFA-208ENST00000417285 AP1G2O75843 785 aa26.85■■□□□ 1.89
VEGFA-208ENST00000417285 AKAP3O75969 853 aa26.85■■□□□ 1.89
VEGFA-208ENST00000417285 PIK3CAP42336 1068 aa26.85■■□□□ 1.89
VEGFA-208ENST00000417285 NDST1P52848 882 aa26.85■■□□□ 1.89
VEGFA-208ENST00000417285 HECTD3Q5T447 861 aa26.85■■□□□ 1.89
VEGFA-208ENST00000417285 SYT13Q7L8C5 426 aa26.85■■□□□ 1.89
VEGFA-208ENST00000417285 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.85■■□□□ 1.89
VEGFA-208ENST00000417285 SCAMP5Q8TAC9 235 aa26.85■■□□□ 1.89
VEGFA-208ENST00000417285 CYP3A43Q9HB55 503 aa26.85■■□□□ 1.89
VEGFA-208ENST00000417285 FAM92AA1XBS5 289 aa26.84■■□□□ 1.89
VEGFA-208ENST00000417285 FOXD2O60548 495 aaPredicted RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms