RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 SCARA5Q6ZMJ2 495 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 PDZD8Q8NEN9 1154 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 OVCA2Q8WZ82 227 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 CD101Q93033 1021 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 MED10Q9BTT4 135 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 SDCBP2Q9H190 292 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 TMEM30AQ9NV96 361 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 C2orf42Q9NWW7 574 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 LEFTY2O00292 366 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 HRO43593 1189 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 NFATC1O95644 943 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 OLFM2O95897 454 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 EGFP01133 1207 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 NR2F2P24468 414 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 SIM2Q14190 667 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 HEATR6Q6AI08 1181 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 PRR23BQ6ZRT6 265 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 INTS8Q75QN2 995 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 FAM35AQ86V20 835 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 WDR5BQ86VZ2 330 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 UNC93AQ86WB7 457 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 GUF1Q8N442 669 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 RMDN1Q96DB5 314 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 SMARCD1Q96GM5 515 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 RNF38Q9H0F5 515 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 LINC00597Q9H2U6 94 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 GOLPH3LQ9H4A5 285 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 FBRSL1Q9HCM7 1045 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 COMMD8Q9NX08 183 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 SLC8A2Q9UPR5 921 aa18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 HELZP42694 1942 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-208ENST00000416159 RNF40O75150 1001 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 ASS1P00966 412 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 OAS1P00973 400 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 HLA-DRAP01903 254 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 KRT13P13646 458 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 TRIM21P19474 475 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 PIK3CAP42336 1068 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 ZXDBP98169 803 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 ENPEPQ07075 957 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 IFRD2Q12894 506 aaPredicted RBP18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 PUM1Q14671 1186 aaKnown RBP eCLIP18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 C1orf220Q5T0J3 134 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 PKN3Q6P5Z2 889 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 PAQR9Q6ZVX9 377 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 ACOT1Q86TX2 421 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 DDX42Q86XP3 938 aaKnown RBP eCLIP18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 CRYBG2Q8N1P7 616 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 FBXO32Q969P5 355 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 ELMO3Q96BJ8 720 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 KCNK16Q96T55 309 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 DMAP1Q9NPF5 467 aaPredicted RBP18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 MAPK8IP1Q9UQF2 711 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 ZNF292O60281 2723 aa18.67■□□□□ 0.58
PDLIM2-208ENST00000416159 CCDC163A0A0D9SF12 145 aa18.66■□□□□ 0.58
PDLIM2-208ENST00000416159 SLC9A3R1O14745 358 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-208ENST00000416159 RETP07949 1114 aa18.66■□□□□ 0.58
PDLIM2-208ENST00000416159 PSMC2P35998 433 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-208ENST00000416159 ADAM9Q13443 819 aa18.66■□□□□ 0.58
PDLIM2-208ENST00000416159 LPAL2Q16609 132 aa18.66■□□□□ 0.58
PDLIM2-208ENST00000416159 CCDC26Q8TAB7 109 aa18.66■□□□□ 0.58
PDLIM2-208ENST00000416159 IMPG2Q9BZV3 1241 aa18.66■□□□□ 0.58
PDLIM2-208ENST00000416159 IL37Q9NZH6 218 aa18.66■□□□□ 0.58
PDLIM2-208ENST00000416159 CPQQ9Y646 472 aa18.66■□□□□ 0.58
PDLIM2-208ENST00000416159 MYH10P35580 1976 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 PRR5-ARHGAP8B1AHC4 643 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 TNFRSF10BO14763 440 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 AP1G2O75843 785 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 AKAP3O75969 853 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 MBL2P11226 248 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 SDHBP21912 280 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 NDST1P52848 882 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 SLC5A3P53794 718 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 ARHGAP8P85298 464 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 NAIF1Q69YI7 327 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 SPOPLQ6IQ16 392 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 CEP68Q76N32 757 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 FAM186BQ8IYM0 893 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 FUKQ8N0W3 1084 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 CAMKK1Q8N5S9 505 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 GDPD2Q9HCC8 539 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 CHORDC1Q9UHD1 332 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 USP18Q9UMW8 372 aa18.65■□□□□ 0.58
PDLIM2-208ENST00000416159 LRP3O75074 770 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 TGM1P22735 817 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 ASPAP45381 313 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 GCLMP48507 274 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 LMNB2Q03252 620 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 SRSF5Q13243 272 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 BECN1Q14457 450 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 RSPO4Q2I0M5 234 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 HECTD3Q5T447 861 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 SNX30Q5VWJ9 437 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 DGLUCYQ7Z3D6 616 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 FILIP1Q7Z7B0 1213 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 ADGRG2Q8IZP9 1017 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 CCDC150Q8NCX0 1101 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 SCAMP5Q8TAC9 235 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 SMOQ99835 787 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 CYP3A43Q9HB55 503 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms