RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 CD2BP2O95400 341 aaKnown RBP16.43■□□□□ 0.22
DDX56-202ENST00000415758 TOP3BO95985 862 aaKnown RBP16.43■□□□□ 0.22
DDX56-202ENST00000415758 SPINK2P20155 84 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 ANXA13P27216 316 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 TNFRSF4P43489 277 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 SLC6A11P48066 632 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 PSMC1P62191 440 aaKnown RBP16.43■□□□□ 0.22
DDX56-202ENST00000415758 MESP2Q0VG99 397 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 BYSLQ13895 437 aaKnown RBP16.43■□□□□ 0.22
DDX56-202ENST00000415758 SURF1Q15526 300 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 DUOXA2Q1HG44 320 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 TRIM61Q5EBN2 209 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 PEAR1Q5VY43 1037 aaPredicted RBP16.43■□□□□ 0.22
DDX56-202ENST00000415758 SLC23A3Q6PIS1 610 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 ALLCQ8N6M5 410 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 TXNDC5Q8NBS9 432 aaKnown RBP16.43■□□□□ 0.22
DDX56-202ENST00000415758 OR5B17Q8NGF7 314 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 WHAMMQ8TF30 809 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 FGFBP2Q9BYJ0 223 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 PCIF1Q9H4Z3 704 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 POLMQ9NP87 494 aaPredicted RBP16.43■□□□□ 0.22
DDX56-202ENST00000415758 TMEM74BQ9NUR3 256 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 FBXO2Q9UK22 296 aaPredicted RBP16.43■□□□□ 0.22
DDX56-202ENST00000415758 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.43■□□□□ 0.22
DDX56-202ENST00000415758 CPQQ9Y646 472 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 PTPRJQ12913 1337 aa16.43■□□□□ 0.22
DDX56-202ENST00000415758 ZNF233A6NK53 670 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 UPK3BL1B0FP48 263 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 UPK3BL2E5RIL1 263 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 TULP1O00294 542 aaPredicted RBP16.42■□□□□ 0.22
DDX56-202ENST00000415758 TNNC2P02585 160 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 APODP05090 189 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 PDGFRBP09619 1106 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 HOXD12P35452 270 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 PTGER3P43115 390 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 CYP27A1Q02318 531 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 MAP7D1Q3KQU3 841 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 EOGTQ5NDL2 527 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 LMBRD2Q68DH5 695 aaPredicted RBP16.42■□□□□ 0.22
DDX56-202ENST00000415758 SFTPA1Q8IWL2 248 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 DEFB124Q8NES8 71 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 KCNV2Q8TDN2 545 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 RLN3Q8WXF3 142 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 SPACA7Q96KW9 195 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 NUSAP1Q9BXS6 441 aaKnown RBP16.42■□□□□ 0.22
DDX56-202ENST00000415758 TBC1D14Q9P2M4 693 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 MBD1Q9UIS9 605 aaPredicted RBP16.42■□□□□ 0.22
DDX56-202ENST00000415758 CLIC4Q9Y696 253 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 AKAP13Q12802 2813 aa16.42■□□□□ 0.22
DDX56-202ENST00000415758 ZFYVE26Q68DK2 2539 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 E2F8A0AVK6 867 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 F8VP50 259 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 MAP3K13O43283 966 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 ADAM23O75077 832 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 TACC1O75410 805 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 KLF8O95600 359 aaPredicted RBP16.41■□□□□ 0.22
DDX56-202ENST00000415758 ADH1CP00326 375 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 IDEP14735 1019 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 TIE1P35590 1138 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 GRIA2P42262 883 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 SEMA3BQ13214 749 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 UAP1L1Q3KQV9 507 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 EMC10Q5UCC4 262 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 PIP4P1Q86T03 277 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 C12orf40Q86WS4 652 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 DDX42Q86XP3 938 aaKnown RBP eCLIP16.41■□□□□ 0.22
DDX56-202ENST00000415758 TMEFF1Q8IYR6 380 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 PHTF2Q8N3S3 785 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 FRMD1Q8N878 549 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 DUSP9Q99956 384 aaKnown RBP16.41■□□□□ 0.22
DDX56-202ENST00000415758 SLC32A1Q9H598 525 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 KIAA1586Q9HCI6 787 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 PANK4Q9NVE7 773 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 PILRBQ9UKJ0 227 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 NEUROG3Q9Y4Z2 214 aa16.41■□□□□ 0.22
DDX56-202ENST00000415758 CACNA1EQ15878 2313 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 SRRM3A6NNA2 597 aaPredicted RBP16.4■□□□□ 0.22
DDX56-202ENST00000415758 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.4■□□□□ 0.22
DDX56-202ENST00000415758 PRPF6O94906 941 aaKnown RBP16.4■□□□□ 0.22
DDX56-202ENST00000415758 ADH5P11766 374 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 ENGP17813 658 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 GNL1P36915 607 aaPredicted RBP16.4■□□□□ 0.22
DDX56-202ENST00000415758 TXLNAP40222 546 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 TAF10Q12962 218 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 RESTQ13127 1097 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 TDRD10Q5VZ19 366 aaKnown RBP16.4■□□□□ 0.22
DDX56-202ENST00000415758 CCDC73Q6ZRK6 1079 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 TRAPPC11Q7Z392 1133 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 TTC30AQ86WT1 665 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 WDR49Q8IV35 697 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 OTUB2Q96DC9 234 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 CLIC6Q96NY7 704 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 SLITRK1Q96PX8 696 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 MMS19Q96T76 1030 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 ARHGEF4Q9NR80 690 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 CFAP97Q9P2B7 532 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 MSRB2Q9Y3D2 182 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 NME7Q9Y5B8 376 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 MORC2Q9Y6X9 1032 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms