RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 HPCAL4Q9UM19 191 aa9.07□□□□□ -0.96
HMGN1P34-201ENST00000413023 SNX24Q9Y343 169 aa9.07□□□□□ -0.96
HMGN1P34-201ENST00000413023 PDCD11Q14690 1871 aaKnown RBP9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 FAM187AA6NFU0 413 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 XPO1O14980 1071 aaKnown RBP9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 ERLIN1O75477 346 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 B3GAT3O94766 335 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 KRT1P04264 644 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 SKIP12755 728 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 HSPA6P17066 643 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 CBX1P83916 185 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 DR1Q01658 176 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 TLE2Q04725 743 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 MMRN1Q13201 1228 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 SMTNL2Q2TAL5 461 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 NOMO2Q5JPE7 1267 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 FAM182AQ5T1J6 154 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 OTUD1Q5VV17 481 aaPredicted RBP9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 CCDC70Q6NSX1 233 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 CCDC137Q6PK04 289 aaKnown RBP9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 HDXQ7Z353 690 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 GLIS1Q8NBF1 620 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 OR10T2Q8NGX3 314 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 CCDC26Q8TAB7 109 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 IPO4Q8TEX9 1081 aaKnown RBP9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 KCTD13Q8WZ19 329 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 RUBCNQ92622 972 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 CENPIQ92674 756 aaPredicted RBP9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 CAVIN3Q969G5 261 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 TNIP3Q96KP6 325 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 SUSD3Q96L08 255 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 HSFY1Q96LI6 401 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 NAP1L3Q99457 506 aaPredicted RBP9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 CNPY3Q9BT09 278 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 DDX23Q9BUQ8 820 aaKnown RBP9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 TRIM31Q9BZY9 425 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 NRDE2Q9H7Z3 1164 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 C10orf88Q9H8K7 445 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 LRRC4CQ9HCJ2 640 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 UBN1Q9NPG3 1134 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 ASNSD1Q9NWL6 643 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 GPATCH2LQ9NWQ4 482 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 SAE1Q9UBE0 346 aaPredicted RBP9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 HESX1Q9UBX0 185 aa9.06□□□□□ -0.96
HMGN1P34-201ENST00000413023 PQBP1O60828 265 aaKnown RBP9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 SYF2O95926 243 aaKnown RBP9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 AMHP03971 560 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 OR4Q2P0C623 313 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 COL6A1P12109 1028 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 MCM3P25205 808 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 CHRNA3P32297 505 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 CYP2C18P33260 490 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 PTPN7P35236 360 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 RPL21P46778 160 aaKnown RBP9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 LHX1P48742 406 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 PGFP49763 221 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 BCAT1P54687 386 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 DRG2P55039 364 aaKnown RBP9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 CCL23P55773 120 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 HDAC4P56524 1084 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 MAP3K7CLP57077 242 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 ATP11AP98196 1134 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 PLCB3Q01970 1234 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 BFSP2Q13515 415 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 ACAP1Q15027 740 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 CCNG2Q16589 344 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 ZC3H12AQ5D1E8 599 aaKnown RBP9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 UBAP2Q5T6F2 1119 aaKnown RBP9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 SYPL2Q5VXT5 272 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 KAZNQ674X7 775 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 SLC26A9Q7LBE3 791 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 BHLHA9Q7RTU4 235 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 BNIPLQ7Z465 357 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 MAATS1Q7Z4T9 603 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 FAM35AQ86V20 835 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 CCDC50Q8IVM0 306 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 IQCKQ8N0W5 287 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 DEFB106AQ8N104 65 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 TMEM86AQ8N2M4 240 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 MYCBPAPQ8TBZ2 947 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 SLCO2A1Q92959 643 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 TBCBQ99426 244 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 TXLNGYQ9BZA5 131 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 TMPRSS4Q9NRS4 437 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 TMEM161AQ9NX61 479 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 CDH9Q9ULB4 789 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 USP18Q9UMW8 372 aa9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.05□□□□□ -0.96
HMGN1P34-201ENST00000413023 LRRD1A4D1F6 860 aa9.04□□□□□ -0.96
HMGN1P34-201ENST00000413023 RRP9O43818 475 aaKnown RBP9.04□□□□□ -0.96
HMGN1P34-201ENST00000413023 CXCL10P02778 98 aa9.04□□□□□ -0.96
HMGN1P34-201ENST00000413023 ZSCAN5DPP0CG00 497 aa9.04□□□□□ -0.96
HMGN1P34-201ENST00000413023 ETS1P14921 441 aa9.04□□□□□ -0.96
HMGN1P34-201ENST00000413023 NPR3P17342 541 aa9.04□□□□□ -0.96
HMGN1P34-201ENST00000413023 ITGB8P26012 769 aa9.04□□□□□ -0.96
HMGN1P34-201ENST00000413023 PCK1P35558 622 aa9.04□□□□□ -0.96
HMGN1P34-201ENST00000413023 PTPN9P43378 593 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms