RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 YIPF1Q9Y548 306 aa11.14□□□□□ -0.63
SMARCAL1-204ENST00000412913 DUSP10Q9Y6W6 482 aa11.14□□□□□ -0.63
SMARCAL1-204ENST00000412913 A0A0A6YYK5 440 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 PIK3R2O00459 728 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 TRIM66O15016 1216 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 TGM5O43548 720 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 GJB6O95452 261 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 CXCL14O95715 111 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 CALB1P05937 261 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 CLCN4P51793 760 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 SLC5A3P53794 718 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 ADIGQ0VDE8 80 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 DUSP4Q13115 394 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 TCEAL1Q15170 157 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 SDHAF4Q5VUM1 108 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 PLEKHA7Q6IQ23 1121 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 KIAA1328Q86T90 577 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 ERICH1Q86X53 443 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 C3orf20Q8ND61 904 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 IPO4Q8TEX9 1081 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 CTNNBL1Q8WYA6 563 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 TRIM11Q96F44 468 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 HSFY1Q96LI6 401 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 UBXN6Q9BZV1 441 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 OSGEPQ9NPF4 335 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 TRMT1Q9NXH9 659 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 CNOT8Q9UFF9 292 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 SLC27A5Q9Y2P5 690 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 USP3Q9Y6I4 520 aa11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 HELZP42694 1942 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-204ENST00000412913 DENND4AQ7Z401 1863 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 FAM92AA1XBS5 289 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 RFXAPO00287 272 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 SOX1O00570 391 aaPredicted RBP11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 CLASP2O75122 1294 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 MTA2O94776 668 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 ADH1AP07327 375 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 MYBL1P10243 752 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 CA8P35219 290 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 HADHBP55084 474 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 DAOAP59103 153 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 USP46P62068 366 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 GPC5P78333 572 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 ZNF252P-AS1Q0IIN9 211 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 DDR2Q16832 855 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 MGAT5BQ3V5L5 792 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 PDE12Q6L8Q7 609 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 TRNP1Q6NT89 227 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 PHLDB2Q86SQ0 1253 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 SCN4BQ8IWT1 228 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 TCEAL8Q8IYN2 117 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 SCML4Q8N228 414 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 MSANTD4Q8NCY6 345 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 JOSD2Q8TAC2 188 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 KHSRPQ92945 711 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 C18orf8Q96DM3 657 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 SPATA17Q96L03 361 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 NOX5Q96PH1 765 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 SEPT5Q99719 369 aaPredicted RBP11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 ULBP1Q9BZM6 244 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 TRIM7Q9C029 511 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 TTYH1Q9H313 450 aaPredicted RBP11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 LUC7LQ9NQ29 371 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 ST7Q9NRC1 585 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 METTL5Q9NRN9 209 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 IL37Q9NZH6 218 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 STRIP2Q9ULQ0 834 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 INSL5Q9Y5Q6 135 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 CAPN6Q9Y6Q1 641 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 NOTCH4Q99466 2003 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 TRANK1O15050 2925 aa11.12□□□□□ -0.63
SMARCAL1-204ENST00000412913 FANCGO15287 622 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 ZSCAN12O43309 604 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 LCP1P13796 627 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 SCNN1AP37088 669 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 GRIK1P39086 918 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 ACADSBP45954 432 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 TKTL1P51854 596 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 SLC8A3P57103 927 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 MRPS5P82675 430 aaKnown RBP11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 OGDHQ02218 1023 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 MAMLD1Q13495 774 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 MTMR3Q13615 1198 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 KCNC3Q14003 757 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 ZNF268Q14587 947 aaPredicted RBP11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 PRPF38BQ5VTL8 546 aaKnown RBP11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 PM20D1Q6GTS8 502 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 DNAJC24Q6P3W2 148 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 HFE2Q6ZVN8 426 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 SLC26A9Q7LBE3 791 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 RHOT2Q8IXI1 618 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 SCAMP5Q8TAC9 235 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 ZNF564Q8TBZ8 553 aaPredicted RBP11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 SLC22A17Q8WUG5 538 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 NDRG1Q92597 394 aaKnown RBP11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 NUP85Q9BW27 656 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 TTLL2Q9BWV7 592 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 EMILIN2Q9BXX0 1053 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 TSGA10Q9BZW7 698 aa11.11□□□□□ -0.63
SMARCAL1-204ENST00000412913 ZNF576Q9H609 170 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms