RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 STK39Q9UEW8 545 aa17.78■□□□□ 0.44
GCFC2-202ENST00000409857 SIX4Q9UIU6 781 aa17.78■□□□□ 0.44
GCFC2-202ENST00000409857 PLXNA4Q9HCM2 1894 aa17.78■□□□□ 0.44
GCFC2-202ENST00000409857 TMEM265A0A087WTH1 108 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 FOXN3O00409 490 aaPredicted RBP17.77■□□□□ 0.44
GCFC2-202ENST00000409857 ITGB3P05106 788 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 GCLMP48507 274 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 EIF3BP55884 814 aaKnown RBP17.77■□□□□ 0.44
GCFC2-202ENST00000409857 PHLDB3Q6NSJ2 640 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 ZDHHC14Q8IZN3 488 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 ZNF560Q96MR9 790 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 PAAF1Q9BRP4 392 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 PABPC3Q9H361 631 aaKnown RBP17.77■□□□□ 0.44
GCFC2-202ENST00000409857 SEMA4AQ9H3S1 761 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 SLC28A3Q9HAS3 691 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 MARCH5Q9NX47 278 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 COQ4Q9Y3A0 265 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 ALG6Q9Y672 507 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 ARHGEF15O94989 841 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 STAU1O95793 577 aaKnown RBP17.77■□□□□ 0.44
GCFC2-202ENST00000409857 MMEP08473 750 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 SLCO1A2P46721 670 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 MXI1P50539 228 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 PPP2R2DQ66LE6 453 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 IGSF21Q96ID5 467 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 SPG21Q9NZD8 308 aa17.77■□□□□ 0.44
GCFC2-202ENST00000409857 GOLGA6L10A0A0M3HER8 536 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 TULP1O00294 542 aaPredicted RBP17.76■□□□□ 0.43
GCFC2-202ENST00000409857 EFEMP2O95967 443 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 POLR2BP30876 1174 aaKnown RBP17.76■□□□□ 0.43
GCFC2-202ENST00000409857 ATICP31939 592 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 PLCB3Q01970 1234 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 DENND2CQ68D51 928 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 ZNF317Q96PQ6 595 aaPredicted RBP17.76■□□□□ 0.43
GCFC2-202ENST00000409857 CXorf56Q9H5V9 222 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 CNOT10Q9H9A5 744 aaKnown RBP17.76■□□□□ 0.43
GCFC2-202ENST00000409857 GRHL1Q9NZI5 618 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 APEX2Q9UBZ4 518 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 TPX2Q9ULW0 747 aaKnown RBP17.76■□□□□ 0.43
GCFC2-202ENST00000409857 RDXP35241 583 aaKnown RBP17.76■□□□□ 0.43
GCFC2-202ENST00000409857 PTGIRP43119 386 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 RPL21P46778 160 aaKnown RBP17.76■□□□□ 0.43
GCFC2-202ENST00000409857 LACTB2Q53H82 288 aaPredicted RBP17.76■□□□□ 0.43
GCFC2-202ENST00000409857 TTC27Q6P3X3 843 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 CD300LGQ6UXG3 332 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 HOOK3Q86VS8 718 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 CEP57Q86XR8 500 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 CPNE8Q86YQ8 564 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 FAM84AQ96KN4 292 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 VRTNQ9H8Y1 702 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.76■□□□□ 0.434e-7■■■■■ 203.4
GCFC2-202ENST00000409857 ADAM28Q9UKQ2 775 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 AGAP1Q9UPQ3 857 aa17.76■□□□□ 0.43
GCFC2-202ENST00000409857 B3GAT3O94766 335 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 VNN1O95497 513 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 NUDT17P0C025 328 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 CTNNB1P35222 781 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 CETN1Q12798 172 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 TRPC3Q13507 836 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 SNCBQ16143 134 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 EPC2Q52LR7 807 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 PRELID2Q8N945 189 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 C3orf58Q8NDZ4 430 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 FBXL13Q8NEE6 735 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 EPS8L3Q8TE67 593 aaKnown RBP17.75■□□□□ 0.43
GCFC2-202ENST00000409857 ATXN2LQ8WWM7 1075 aaKnown RBP17.75■□□□□ 0.43
GCFC2-202ENST00000409857 SGSM3Q96HU1 749 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 C17orf80Q9BSJ5 609 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 CACNG4Q9UBN1 327 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 PRG3Q9Y2Y8 225 aaPredicted RBP17.75■□□□□ 0.43
GCFC2-202ENST00000409857 TCRBV7S2A1N4TA0A589 114 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 ANKRD62A6NC57 917 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 TAF6P49848 677 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 LILRA4P59901 499 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 MYL7Q01449 175 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 MYO1EQ12965 1108 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 NCOA4Q13772 614 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 SV2CQ496J9 727 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 C11orf84Q9BUA3 381 aaPredicted RBP17.75■□□□□ 0.43
GCFC2-202ENST00000409857 LZTS1Q9Y250 596 aa17.75■□□□□ 0.43
GCFC2-202ENST00000409857 FAM187AA6NFU0 413 aa17.74■□□□□ 0.43
GCFC2-202ENST00000409857 TADA2AO75478 443 aa17.74■□□□□ 0.43
GCFC2-202ENST00000409857 CST3P01034 146 aaPredicted RBP17.74■□□□□ 0.43
GCFC2-202ENST00000409857 KRT19P08727 400 aa17.74■□□□□ 0.43
GCFC2-202ENST00000409857 MMP13P45452 471 aa17.74■□□□□ 0.43
GCFC2-202ENST00000409857 ELAVL2Q12926 359 aaKnown RBP17.74■□□□□ 0.43
GCFC2-202ENST00000409857 LLGL1Q15334 1064 aa17.74■□□□□ 0.43
GCFC2-202ENST00000409857 SGSM1Q2NKQ1 1148 aa17.74■□□□□ 0.43
GCFC2-202ENST00000409857 RNF168Q8IYW5 571 aaPredicted RBP17.74■□□□□ 0.43
GCFC2-202ENST00000409857 LRRC34Q8IZ02 419 aa17.74■□□□□ 0.43
GCFC2-202ENST00000409857 TMEM169Q96HH4 297 aa17.74■□□□□ 0.43
GCFC2-202ENST00000409857 NAP1L3Q99457 506 aaPredicted RBP17.74■□□□□ 0.43
GCFC2-202ENST00000409857 PRMT1Q99873 361 aaKnown RBP17.74■□□□□ 0.43
GCFC2-202ENST00000409857 CTTNBP2NLQ9P2B4 639 aa17.74■□□□□ 0.43
GCFC2-202ENST00000409857 TSC2P49815 1807 aa17.74■□□□□ 0.43
GCFC2-202ENST00000409857 SF3B1O75533 1304 aaKnown RBP eCLIP17.74■□□□□ 0.436e-7■■■■■ 95.6
GCFC2-202ENST00000409857 TRIOBPQ9H2D6 2365 aa17.74■□□□□ 0.43
GCFC2-202ENST00000409857 PPEF2O14830 753 aa17.74■□□□□ 0.43
GCFC2-202ENST00000409857 RGS16O15492 202 aaPredicted RBP17.74■□□□□ 0.43
GCFC2-202ENST00000409857 ATMINO43313 823 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms