RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 WDTC1Q8N5D0 677 aa16.09■□□□□ 0.17
AP1S3-204ENST00000409375 ZMIZ2Q8NF64 920 aa16.09■□□□□ 0.17
AP1S3-204ENST00000409375 SLC7A14Q8TBB6 771 aa16.09■□□□□ 0.17
AP1S3-204ENST00000409375 GOLGA1Q92805 767 aa16.09■□□□□ 0.17
AP1S3-204ENST00000409375 ZNF653Q96CK0 615 aa16.09■□□□□ 0.17
AP1S3-204ENST00000409375 ZNF830Q96NB3 372 aaPredicted RBP16.09■□□□□ 0.17
AP1S3-204ENST00000409375 CPXM1Q96SM3 734 aa16.09■□□□□ 0.17
AP1S3-204ENST00000409375 C11orf70Q9BRQ4 267 aa16.09■□□□□ 0.17
AP1S3-204ENST00000409375 TRIM62Q9BVG3 475 aa16.09■□□□□ 0.17
AP1S3-204ENST00000409375 MRPL47Q9HD33 250 aaKnown RBP16.09■□□□□ 0.17
AP1S3-204ENST00000409375 CNGB3Q9NQW8 809 aa16.09■□□□□ 0.17
AP1S3-204ENST00000409375 DZANK1Q9NVP4 752 aa16.09■□□□□ 0.17
AP1S3-204ENST00000409375 PCDHA13Q9Y5I0 950 aa16.09■□□□□ 0.17
AP1S3-204ENST00000409375 PATJQ8NI35 1801 aa16.09■□□□□ 0.17
AP1S3-204ENST00000409375 PLXNA3P51805 1871 aa16.08■□□□□ 0.17
AP1S3-204ENST00000409375 NCK2O43639 380 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 BEST1O76090 585 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 SEC24AO95486 1093 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 VNN2O95498 520 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 HNRNPA1P09651 372 aaKnown RBP eCLIP16.08■□□□□ 0.16
AP1S3-204ENST00000409375 TMEM253P0C7T8 217 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 ABCB4P21439 1286 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 HOXA9P31269 272 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 SCNN1AP37088 669 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 TKTL1P51854 596 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 VAV2P52735 878 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 SLC5A3P53794 718 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 CACNA2D1P54289 1103 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 GALCP54803 685 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 GPC5P78333 572 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 ADIGQ0VDE8 80 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 KIF5AQ12840 1032 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 ZNF268Q14587 947 aaPredicted RBP16.08■□□□□ 0.16
AP1S3-204ENST00000409375 DDR2Q16832 855 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 PTPN20Q4JDL3 420 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 RAB41Q5JT25 222 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 SCML4Q8N228 414 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 TTC9BQ8N6N2 239 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 SLC22A17Q8WUG5 538 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 CASP10Q92851 521 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 TSGA10Q9BZW7 698 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 TTYH1Q9H313 450 aaPredicted RBP16.08■□□□□ 0.16
AP1S3-204ENST00000409375 MAN1C1Q9NR34 630 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 ZDHHC7Q9NXF8 308 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 TAS2R14Q9NYV8 317 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 UXTQ9UBK9 157 aaPredicted RBP16.08■□□□□ 0.16
AP1S3-204ENST00000409375 CYTH4Q9UIA0 394 aa16.08■□□□□ 0.16
AP1S3-204ENST00000409375 HHLA1C9JL84 531 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 E5RJQ4 531 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 TULP2O00295 520 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 PER2O15055 1255 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 KRT86O43790 486 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 XYLBO75191 536 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 ZMYND10O75800 440 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 ZBED1O96006 694 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 SPATA31D3P0C874 917 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 LCP1P13796 627 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 DESP17661 470 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 POU3F3P20264 500 aaPredicted RBP16.07■□□□□ 0.16
AP1S3-204ENST00000409375 GSCP56915 257 aaPredicted RBP16.07■□□□□ 0.16
AP1S3-204ENST00000409375 TWF1Q12792 350 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 OR6B2Q6IFH4 312 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 DNAJC24Q6P3W2 148 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 SPATA31D4Q6ZUB0 917 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 ADGRD2Q7Z7M1 963 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 ARHGAP18Q8N392 663 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 C3orf20Q8ND61 904 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 ACRBPQ8NEB7 543 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 PDZD8Q8NEN9 1154 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 IRGQQ8WZA9 623 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 CALR3Q96L12 384 aaKnown RBP16.07■□□□□ 0.16
AP1S3-204ENST00000409375 ZNF512Q96ME7 567 aaPredicted RBP16.07■□□□□ 0.16
AP1S3-204ENST00000409375 SLITRK1Q96PX8 696 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 DESI2Q9BSY9 194 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 CRISPLD1Q9H336 500 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 AVENQ9NQS1 362 aaPredicted RBP16.07■□□□□ 0.16
AP1S3-204ENST00000409375 TMEM30AQ9NV96 361 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 PARVAQ9NVD7 372 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 CNOT8Q9UFF9 292 aaKnown RBP16.07■□□□□ 0.16
AP1S3-204ENST00000409375 PYCARDQ9ULZ3 195 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 ZKSCAN5Q9Y2L8 839 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 HCFC2Q9Y5Z7 792 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 ADGRG1Q9Y653 693 aa16.07■□□□□ 0.16
AP1S3-204ENST00000409375 ATG2AQ2TAZ0 1938 aa16.06■□□□□ 0.16
AP1S3-204ENST00000409375 GOLGA6L9A6NEM1 432 aa16.06■□□□□ 0.16
AP1S3-204ENST00000409375 SLC38A8A6NNN8 435 aa16.06■□□□□ 0.16
AP1S3-204ENST00000409375 SOX1O00570 391 aaPredicted RBP16.06■□□□□ 0.16
AP1S3-204ENST00000409375 ZNF263O14978 683 aa16.06■□□□□ 0.16
AP1S3-204ENST00000409375 ERBB2P04626 1255 aa16.06■□□□□ 0.16
AP1S3-204ENST00000409375 GLI1P08151 1106 aa16.06■□□□□ 0.16
AP1S3-204ENST00000409375 EPCAMP16422 314 aa16.06■□□□□ 0.16
AP1S3-204ENST00000409375 ATF6P18850 670 aa16.06■□□□□ 0.16
AP1S3-204ENST00000409375 YWHAQP27348 245 aa16.06■□□□□ 0.16
AP1S3-204ENST00000409375 PSEN1P49768 467 aa16.06■□□□□ 0.16
AP1S3-204ENST00000409375 IFRD2Q12894 506 aaPredicted RBP16.06■□□□□ 0.16
AP1S3-204ENST00000409375 GRIN2CQ14957 1233 aa16.06■□□□□ 0.16
AP1S3-204ENST00000409375 IFI16Q16666 785 aaKnown RBP16.06■□□□□ 0.16
AP1S3-204ENST00000409375 EFHC1Q5JVL4 640 aa16.06■□□□□ 0.16
AP1S3-204ENST00000409375 FAM102AQ5T9C2 384 aaPredicted RBP16.06■□□□□ 0.16
AP1S3-204ENST00000409375 RHOT2Q8IXI1 618 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms