RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 GAP43P17677 238 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 POLR2BP30876 1174 aaKnown RBP8.29□□□□□ -1.08
LSM5-202ENST00000409292 HOXD12P35452 270 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 LONP1P36776 959 aaKnown RBP8.29□□□□□ -1.08
LSM5-202ENST00000409292 MAPK8P45983 427 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 TOB1P50616 345 aaPredicted RBP8.29□□□□□ -1.08
LSM5-202ENST00000409292 SEC13P55735 322 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 RBP5P82980 135 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 GFPT1Q06210 699 aaPredicted RBP8.29□□□□□ -1.08
LSM5-202ENST00000409292 ALCAMQ13740 583 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 SURF1Q15526 300 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 ZNF77Q15935 545 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 EML3Q32P44 896 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 CFAP221Q4G0U5 840 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 TMEM119Q4V9L6 283 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 TRIM61Q5EBN2 209 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 LYSMD4Q5XG99 296 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 SDE2Q6IQ49 451 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 VSTM1Q6UX27 236 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 SLC36A4Q6YBV0 504 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 STXBP4Q6ZWJ1 553 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 DPH6Q7L8W6 267 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 LRRTM3Q86VH5 581 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 SYT12Q8IV01 421 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 EFCAB13Q8IY85 973 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 USP33Q8TEY7 942 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 NOC3LQ8WTT2 800 aaKnown RBP8.29□□□□□ -1.08
LSM5-202ENST00000409292 TSC1Q92574 1164 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 ANKRD36BP1Q96IX9 119 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 MYRFLQ96LU7 910 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 ACCSQ96QU6 501 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 PNKPQ96T60 521 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 SCNM1Q9BWG6 230 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 HAPLN2Q9GZV7 340 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 MAP10Q9P2G4 905 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 TBC1D14Q9P2M4 693 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 SEL1LQ9UBV2 794 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 ITGA11Q9UKX5 1188 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 ARHGAP26Q9UNA1 814 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 AGAP1Q9UPQ3 857 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 NEUROG3Q9Y4Z2 214 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 ATG2BQ96BY7 2078 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 OTOL1A6NHN0 477 aaPredicted RBP8.28□□□□□ -1.08
LSM5-202ENST00000409292 AP5Z1O43299 807 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 FAM189A1O60320 539 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 OPHN1O60890 802 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 ABL1P00519 1130 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 TNNC2P02585 160 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 ITGB3P05106 788 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 CFIP05156 583 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 SYPP08247 313 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 TCF3P15923 654 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 TRIM21P19474 475 aaKnown RBP8.28□□□□□ -1.08
LSM5-202ENST00000409292 CYP2F1P24903 491 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 GRIK1P39086 918 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 EIF2DP41214 584 aaKnown RBP8.28□□□□□ -1.08
LSM5-202ENST00000409292 MAGEA11P43364 429 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 CDR1P51861 262 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 ZNF131P52739 623 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 USP4Q13107 963 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 COL9A2Q14055 689 aaPredicted RBP8.28□□□□□ -1.08
LSM5-202ENST00000409292 CRY1Q16526 586 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 IL17AQ16552 155 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 QPCTQ16769 361 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 ARSHQ5FYA8 562 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 DENND5BQ6ZUT9 1274 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 TMEM150AQ86TG1 271 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 RASSF3Q86WH2 238 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 ADGRF2Q8IZF7 708 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 PDCL2Q8N4E4 241 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 CCDC33Q8N5R6 958 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 CSGALNACT2Q8N6G5 542 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 TOP6BLQ8N6T0 577 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 ARL14EPQ8N8R7 260 aaPredicted RBP8.28□□□□□ -1.08
LSM5-202ENST00000409292 STKLD1Q8NE28 680 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 DEFB124Q8NES8 71 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 LARP4BQ92615 738 aaKnown RBP8.28□□□□□ -1.08
LSM5-202ENST00000409292 RAD54LQ92698 747 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 SLITRK1Q96PX8 696 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 FAM213AQ9BRX8 229 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 ST6GALNAC4Q9H4F1 302 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 MRPL44Q9H9J2 332 aaKnown RBP8.28□□□□□ -1.08
LSM5-202ENST00000409292 FBRSL1Q9HCM7 1045 aaKnown RBP8.28□□□□□ -1.08
LSM5-202ENST00000409292 RBAKQ9NYW8 714 aaPredicted RBP8.28□□□□□ -1.08
LSM5-202ENST00000409292 GTF3C4Q9UKN8 822 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 SLC6A14Q9UN76 642 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 INVSQ9Y283 1065 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 PCDHB9Q9Y5E1 797 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 SNX9Q9Y5X1 595 aa8.28□□□□□ -1.08
LSM5-202ENST00000409292 ATRXP46100 2492 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 USP24Q9UPU5 2620 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 EIF4E1BA6NMX2 242 aaKnown RBP8.27□□□□□ -1.09
LSM5-202ENST00000409292 GIPC1O14908 333 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 KIAA0391O15091 583 aaKnown RBP8.27□□□□□ -1.09
LSM5-202ENST00000409292 WFS1O76024 890 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 CLSTN1O94985 981 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 SNRPBP14678 240 aaKnown RBP8.27□□□□□ -1.09
LSM5-202ENST00000409292 ACAT1P24752 427 aaKnown RBP8.27□□□□□ -1.09
LSM5-202ENST00000409292 GRIA2P42262 883 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 TNFRSF4P43489 277 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms