RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 ATP2A3Q93084 1043 aa9.81□□□□□ -0.84
NIF3L1-203ENST00000409129 MARVELD3Q96A59 401 aa9.81□□□□□ -0.84
NIF3L1-203ENST00000409129 HPDLQ96IR7 371 aa9.81□□□□□ -0.84
NIF3L1-203ENST00000409129 SPATA17Q96L03 361 aa9.81□□□□□ -0.84
NIF3L1-203ENST00000409129 USP28Q96RU2 1077 aa9.81□□□□□ -0.84
NIF3L1-203ENST00000409129 SLC22A12Q96S37 553 aa9.81□□□□□ -0.84
NIF3L1-203ENST00000409129 LRRC27Q9C0I9 530 aa9.81□□□□□ -0.84
NIF3L1-203ENST00000409129 GCNT4Q9P109 453 aa9.81□□□□□ -0.84
NIF3L1-203ENST00000409129 MAGEC2Q9UBF1 373 aaPredicted RBP9.81□□□□□ -0.84
NIF3L1-203ENST00000409129 CDH9Q9ULB4 789 aa9.81□□□□□ -0.84
NIF3L1-203ENST00000409129 TENM4Q6N022 2769 aa9.81□□□□□ -0.84
NIF3L1-203ENST00000409129 PTPRDP23468 1912 aa9.81□□□□□ -0.84
NIF3L1-203ENST00000409129 CEP192Q8TEP8 1941 aa9.81□□□□□ -0.84
NIF3L1-203ENST00000409129 TNRC6BQ9UPQ9 1833 aaKnown RBP9.81□□□□□ -0.84
NIF3L1-203ENST00000409129 C2orf78A6NCI8 922 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 C4orf47A7E2U8 309 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 HYAL3O43820 417 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 TNNC2P02585 160 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 TCF3P15923 654 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 HDCP19113 662 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 GRIK1P39086 918 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 MPLP40238 635 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 IFNAR2P48551 515 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 USP4Q13107 963 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 NR1H3Q13133 447 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 MAPRE1Q15691 268 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 EML3Q32P44 896 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 NAIF1Q69YI7 327 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 VSTM1Q6UX27 236 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 SYT13Q7L8C5 426 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 CBWD2Q8IUF1 395 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 PDILTQ8N807 584 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 GLIS3Q8NEA6 775 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 TTC16Q8NEE8 873 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 RPLP0P6Q8NHW5 317 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 SH3RF2Q8TEC5 729 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 KBTBD7Q8WVZ9 684 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 CD101Q93033 1021 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 INTS4Q96HW7 963 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 ZC3H10Q96K80 434 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 CEP295NLQ96MC4 621 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 SYT15Q9BQS2 421 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 EDEM2Q9BV94 578 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 LINC00597Q9H2U6 94 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 ZSCAN16Q9H4T2 348 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 SLC24A3Q9HC58 644 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 KIAA1586Q9HCI6 787 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 POLR3BQ9NW08 1133 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 KLK13Q9UKR3 277 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 MTMR6Q9Y217 621 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 WNT6Q9Y6F9 365 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 DENND4CQ5VZ89 1909 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 PTPRJQ12913 1337 aa9.8□□□□□ -0.84
NIF3L1-203ENST00000409129 APC2O95996 2303 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 PTPRBP23467 1997 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 PDGFRBP09619 1106 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 PFKLP17858 780 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 WARSP23381 471 aaKnown RBP9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 BDNFP23560 247 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 HOXD13P35453 343 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 NASPP49321 788 aaPredicted RBP9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 PDE6CP51160 858 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 EMP3P54852 163 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 PSMC1P62191 440 aaKnown RBP9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 PSMD2Q13200 908 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 KCNB1Q14721 858 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 TRAPPC11Q7Z392 1133 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 PDZD3Q86UT5 571 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 WDR49Q8IV35 697 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 MYCBPAPQ8TBZ2 947 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 ZNF507Q8TCN5 953 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 EZH1Q92800 747 aaPredicted RBP9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 HPS3Q969F9 1004 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 MYLPFQ96A32 169 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 HHIPQ96QV1 700 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 MMS19Q96T76 1030 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 TNMDQ9H2S6 317 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 CRTAC1Q9NQ79 661 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 KBTBD4Q9NVX7 518 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 HSPBP1Q9NZL4 362 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 TRPM5Q9NZQ8 1165 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 EBF1Q9UH73 591 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 ARHGAP26Q9UNA1 814 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 PCDHGA5Q9Y5G8 931 aa9.79□□□□□ -0.84
NIF3L1-203ENST00000409129 SPTLC2O15270 562 aa9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 EIF3DO15371 548 aaKnown RBP eCLIP9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 STX6O43752 255 aa9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 NFATC1O95644 943 aa9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 APBB3O95704 486 aa9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 CST3P01034 146 aaPredicted RBP9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 FAM163BP0C2L3 166 aa9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 ANXA13P27216 316 aa9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 GNL1P36915 607 aaPredicted RBP9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 PPP3CCP48454 512 aa9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 USP46P62068 366 aa9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 ZXDBP98169 803 aa9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 AMPD3Q01432 767 aa9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 CYP27A1Q02318 531 aa9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 DMC1Q14565 340 aa9.78□□□□□ -0.84
NIF3L1-203ENST00000409129 STK38Q15208 465 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms