RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 C15orf59Q2T9L4 293 aaPredicted RBP19.88■□□□□ 0.77
USP39-202ENST00000409025 HSPH1Q92598 858 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 SNF8Q96H20 258 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 NCAPGQ9BPX3 1015 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 B3GNT5Q9BYG0 378 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 TXLNGYQ9BZA5 131 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 DDX43Q9NXZ2 648 aaKnown RBP19.88■□□□□ 0.77
USP39-202ENST00000409025 ATP8A1Q9Y2Q0 1164 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 A0A1W2PQ45 241 aaPredicted RBP19.87■□□□□ 0.77
USP39-202ENST00000409025 A0A1W2PQY0 241 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 XPO1O14980 1071 aaKnown RBP19.87■□□□□ 0.77
USP39-202ENST00000409025 PRPSAP2O60256 369 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 LCP1P13796 627 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 ATF2P15336 505 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 TKTP29401 623 aaKnown RBP19.87■□□□□ 0.77
USP39-202ENST00000409025 PRMT2P55345 433 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 TAZQ16635 292 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 UPP1Q16831 310 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 CDO1Q16878 200 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 SH3PXD2AQ5TCZ1 1133 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 GSTA5Q7RTV2 222 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 CCDC89Q8N998 374 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 KHSRPQ92945 711 aaKnown RBP eCLIP19.87■□□□□ 0.77
USP39-202ENST00000409025 CFAP57Q96MR6 1250 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 DUSP16Q9BY84 665 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 TRPV6Q9H1D0 765 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 STARD7Q9NQZ5 370 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 ADAM21Q9UKJ8 722 aa19.87■□□□□ 0.77
USP39-202ENST00000409025 POMCP01189 267 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 GRK4P32298 578 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 ATP11AP98196 1134 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 GRIK3Q13003 919 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 TRIP13Q15645 432 aaPredicted RBP19.86■□□□□ 0.77
USP39-202ENST00000409025 SLC26A9Q7LBE3 791 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 FUKQ8N0W3 1084 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 TTC13Q8NBP0 860 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 ZNF784Q8NCA9 323 aaPredicted RBP19.86■□□□□ 0.77
USP39-202ENST00000409025 PEBP4Q96S96 227 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 MED10Q9BTT4 135 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 FAM204AQ9H8W3 233 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 DNPEPQ9ULA0 475 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 ZNF148Q9UQR1 794 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 DRG1Q9Y295 367 aaKnown RBP19.86■□□□□ 0.77
USP39-202ENST00000409025 NEU2Q9Y3R4 380 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 ADCY8P40145 1251 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 PMS2P54278 862 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 CAV1Q03135 178 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 MDH1BQ5I0G3 518 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 BBS12Q6ZW61 710 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 ARCQ7LC44 396 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 ECHDC2Q86YB7 292 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 SLC43A3Q8NBI5 491 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 BBOF1Q8ND07 529 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 C3orf58Q8NDZ4 430 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 FRMD8P1Q9BZ68 369 aaPredicted RBP19.86■□□□□ 0.77
USP39-202ENST00000409025 NGRNQ9NPE2 291 aaKnown RBP19.86■□□□□ 0.77
USP39-202ENST00000409025 PRDM10Q9NQV6 1147 aa19.86■□□□□ 0.77
USP39-202ENST00000409025 GOLGA6CA6NDK9 693 aa19.85■□□□□ 0.77
USP39-202ENST00000409025 CST8O60676 142 aa19.85■□□□□ 0.77
USP39-202ENST00000409025 KRT14P02533 472 aa19.85■□□□□ 0.77
USP39-202ENST00000409025 GOLGA6DP0CG33 693 aa19.85■□□□□ 0.77
USP39-202ENST00000409025 NPR3P17342 541 aa19.85■□□□□ 0.77
USP39-202ENST00000409025 BOLA3Q53S33 107 aa19.85■□□□□ 0.77
USP39-202ENST00000409025 RFX6Q8HWS3 928 aa19.85■□□□□ 0.77
USP39-202ENST00000409025 CCHCR1Q8TD31 782 aa19.85■□□□□ 0.77
USP39-202ENST00000409025 CLEC4CQ8WTT0 213 aa19.85■□□□□ 0.77
USP39-202ENST00000409025 FAM172AQ8WUF8 416 aa19.85■□□□□ 0.77
USP39-202ENST00000409025 ZNF296Q8WUU4 475 aaPredicted RBP19.85■□□□□ 0.77
USP39-202ENST00000409025 HAUS1Q96CS2 278 aa19.85■□□□□ 0.77
USP39-202ENST00000409025 SYT15Q9BQS2 421 aa19.85■□□□□ 0.77
USP39-202ENST00000409025 GOLGA6AQ9NYA3 693 aa19.85■□□□□ 0.77
USP39-202ENST00000409025 INPP5FQ9Y2H2 1132 aa19.85■□□□□ 0.77
USP39-202ENST00000409025 TDRD15B5MCY1 1934 aaKnown RBP19.85■□□□□ 0.77
USP39-202ENST00000409025 CLDN5O00501 218 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 CD48P09326 243 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 IVDP26440 423 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 PTPN9P43378 593 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 VCPP55072 806 aaKnown RBP19.84■□□□□ 0.77
USP39-202ENST00000409025 DYNLT1P63172 113 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 PLCB3Q01970 1234 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 SLMAPQ14BN4 828 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 EFHC1Q5JVL4 640 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 CEP85LQ5SZL2 805 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 SCYL2Q6P3W7 929 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 PIGZQ86VD9 579 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 NKD2Q969F2 451 aaPredicted RBP19.84■□□□□ 0.77
USP39-202ENST00000409025 EXOC4Q96A65 974 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 PAAF1Q9BRP4 392 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 CALN1Q9BXU9 219 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.84■□□□□ 0.77
USP39-202ENST00000409025 TIMM13Q9Y5L4 95 aaPredicted RBP19.84■□□□□ 0.77
USP39-202ENST00000409025 FRMPD3Q5JV73 1810 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 GOLGA6L10A6NI86 522 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 H0YGN5 161 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 ODC1P11926 461 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 PAX3P23760 479 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 CDH6P55285 790 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 TUSC3Q13454 348 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 TIGD5Q53EQ6 642 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 RAB6CQ53S08 254 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms